Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CNKSR1Q969H4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CNKSR1Q969H4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CNKSR1Q969H4 SLC6A10P-202ENST00000431994 2058 ntBASIC28.18■■■□□ 2.1
CNKSR1Q969H4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CNKSR1Q969H4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC28.18■■■□□ 2.1
CNKSR1Q969H4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CNKSR1Q969H4 ID1-201ENST00000376105 1233 ntBASIC28.17■■■□□ 2.1
CNKSR1Q969H4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC28.17■■■□□ 2.1
CNKSR1Q969H4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CNKSR1Q969H4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.17■■■□□ 2.1
CNKSR1Q969H4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CNKSR1Q969H4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CNKSR1Q969H4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CNKSR1Q969H4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CNKSR1Q969H4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC28.16■■■□□ 2.1
CNKSR1Q969H4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.16■■■□□ 2.1
CNKSR1Q969H4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC28.16■■■□□ 2.1
CNKSR1Q969H4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CNKSR1Q969H4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
CNKSR1Q969H4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC28.15■■■□□ 2.1
CNKSR1Q969H4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.15■■■□□ 2.1
CNKSR1Q969H4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.15■■■□□ 2.1
CNKSR1Q969H4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC28.15■■■□□ 2.1
CNKSR1Q969H4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.15■■■□□ 2.1
CNKSR1Q969H4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
CNKSR1Q969H4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.1
CNKSR1Q969H4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
CNKSR1Q969H4 MIR572-201ENST00000384983 95 ntBASIC28.14■■■□□ 2.1
CNKSR1Q969H4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
CNKSR1Q969H4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
CNKSR1Q969H4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
CNKSR1Q969H4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC28.13■■■□□ 2.09
CNKSR1Q969H4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC28.13■■■□□ 2.09
CNKSR1Q969H4 IGHV3-19-201ENST00000521488 291 ntBASIC28.13■■■□□ 2.09
CNKSR1Q969H4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC28.13■■■□□ 2.09
CNKSR1Q969H4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CNKSR1Q969H4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CNKSR1Q969H4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CNKSR1Q969H4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CNKSR1Q969H4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.12■■■□□ 2.09
CNKSR1Q969H4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CNKSR1Q969H4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.12■■■□□ 2.09
CNKSR1Q969H4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC28.12■■■□□ 2.09
CNKSR1Q969H4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC28.12■■■□□ 2.09
CNKSR1Q969H4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.12■■■□□ 2.09
CNKSR1Q969H4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC28.12■■■□□ 2.09
CNKSR1Q969H4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CNKSR1Q969H4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.12■■■□□ 2.09
CNKSR1Q969H4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CNKSR1Q969H4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.12■■■□□ 2.09
CNKSR1Q969H4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CNKSR1Q969H4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
CNKSR1Q969H4 AC092803.2-201ENST00000564287 1899 ntBASIC28.11■■■□□ 2.09
CNKSR1Q969H4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CNKSR1Q969H4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CNKSR1Q969H4 GXYLT1P2-201ENST00000433312 1230 ntBASIC28.11■■■□□ 2.09
CNKSR1Q969H4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
CNKSR1Q969H4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC28.11■■■□□ 2.09
CNKSR1Q969H4 AC012414.1-201ENST00000556676 535 ntBASIC28.11■■■□□ 2.09
CNKSR1Q969H4 AL354811.1-201ENST00000610286 706 ntBASIC28.11■■■□□ 2.09
CNKSR1Q969H4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC28.11■■■□□ 2.09
CNKSR1Q969H4 MIR6084-201ENST00000622012 110 ntBASIC28.11■■■□□ 2.09
CNKSR1Q969H4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CNKSR1Q969H4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.11■■■□□ 2.09
CNKSR1Q969H4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CNKSR1Q969H4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.1■■■□□ 2.09
CNKSR1Q969H4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
CNKSR1Q969H4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.1■■■□□ 2.09
CNKSR1Q969H4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
CNKSR1Q969H4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC28.09■■■□□ 2.09
CNKSR1Q969H4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.09■■■□□ 2.09
CNKSR1Q969H4 CCDC92B-201ENST00000575506 885 ntBASIC28.09■■■□□ 2.09
CNKSR1Q969H4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
CNKSR1Q969H4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CNKSR1Q969H4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.09■■■□□ 2.09
CNKSR1Q969H4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
CNKSR1Q969H4 AC141586.4-201ENST00000624558 1573 ntBASIC28.08■■■□□ 2.09
CNKSR1Q969H4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CNKSR1Q969H4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC28.08■■■□□ 2.09
CNKSR1Q969H4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CNKSR1Q969H4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC28.08■■■□□ 2.09
CNKSR1Q969H4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC28.08■■■□□ 2.09
CNKSR1Q969H4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CNKSR1Q969H4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
CNKSR1Q969H4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.08■■■□□ 2.09
CNKSR1Q969H4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.08■■■□□ 2.09
CNKSR1Q969H4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.07■■■□□ 2.08
CNKSR1Q969H4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CNKSR1Q969H4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
CNKSR1Q969H4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC28.07■■■□□ 2.08
CNKSR1Q969H4 NTF6G-201ENST00000591094 616 ntBASIC28.07■■■□□ 2.08
CNKSR1Q969H4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CNKSR1Q969H4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CNKSR1Q969H4 AL161729.1-201ENST00000604104 1402 ntBASIC28.07■■■□□ 2.08
CNKSR1Q969H4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CNKSR1Q969H4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CNKSR1Q969H4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CNKSR1Q969H4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CNKSR1Q969H4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms