Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD6Q8TD26 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHD6Q8TD26 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD6Q8TD26 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CHD6Q8TD26 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD6Q8TD26 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD6Q8TD26 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.02■□□□□ 0.96
CHD6Q8TD26 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD6Q8TD26 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD6Q8TD26 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.02■□□□□ 0.96
CHD6Q8TD26 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.02■□□□□ 0.96
CHD6Q8TD26 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CHD6Q8TD26 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD6Q8TD26 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHD6Q8TD26 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD6Q8TD26 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CHD6Q8TD26 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD6Q8TD26 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD6Q8TD26 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.01■□□□□ 0.95
CHD6Q8TD26 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD6Q8TD26 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21■□□□□ 0.95
CHD6Q8TD26 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21■□□□□ 0.95
CHD6Q8TD26 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD6Q8TD26 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CHD6Q8TD26 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD6Q8TD26 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CHD6Q8TD26 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21■□□□□ 0.95
CHD6Q8TD26 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CHD6Q8TD26 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21■□□□□ 0.95
CHD6Q8TD26 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CHD6Q8TD26 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD6Q8TD26 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD6Q8TD26 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.99■□□□□ 0.95
CHD6Q8TD26 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD6Q8TD26 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CHD6Q8TD26 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD6Q8TD26 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD6Q8TD26 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.98■□□□□ 0.95
CHD6Q8TD26 MFSD11-216ENST00000590393 1141 ntBASIC20.98■□□□□ 0.95
CHD6Q8TD26 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.98■□□□□ 0.95
CHD6Q8TD26 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD6Q8TD26 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.98■□□□□ 0.95
CHD6Q8TD26 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD6Q8TD26 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD6Q8TD26 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD6Q8TD26 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.98■□□□□ 0.95
CHD6Q8TD26 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.98■□□□□ 0.95
CHD6Q8TD26 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD6Q8TD26 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD6Q8TD26 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD6Q8TD26 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CHD6Q8TD26 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CHD6Q8TD26 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD6Q8TD26 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CHD6Q8TD26 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.96■□□□□ 0.95
CHD6Q8TD26 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD6Q8TD26 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD6Q8TD26 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.96■□□□□ 0.95
CHD6Q8TD26 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD6Q8TD26 AC011767.1-201ENST00000617410 1153 ntBASIC20.96■□□□□ 0.95
CHD6Q8TD26 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CHD6Q8TD26 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD6Q8TD26 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD6Q8TD26 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.95■□□□□ 0.94
CHD6Q8TD26 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CHD6Q8TD26 AL445228.2-201ENST00000605589 952 ntBASIC20.95■□□□□ 0.94
CHD6Q8TD26 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.95■□□□□ 0.94
CHD6Q8TD26 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.95■□□□□ 0.94
CHD6Q8TD26 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CHD6Q8TD26 AC073912.3-201ENST00000624414 853 ntBASIC20.94■□□□□ 0.94
CHD6Q8TD26 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.94■□□□□ 0.94
CHD6Q8TD26 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD6Q8TD26 ST7-AS1-201ENST00000456775 1889 ntBASIC20.94■□□□□ 0.94
CHD6Q8TD26 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD6Q8TD26 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
CHD6Q8TD26 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD6Q8TD26 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD6Q8TD26 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD6Q8TD26 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD6Q8TD26 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD6Q8TD26 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD6Q8TD26 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHD6Q8TD26 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD6Q8TD26 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.93■□□□□ 0.94
CHD6Q8TD26 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CHD6Q8TD26 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CHD6Q8TD26 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHD6Q8TD26 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CHD6Q8TD26 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.92■□□□□ 0.94
CHD6Q8TD26 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHD6Q8TD26 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD6Q8TD26 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.92■□□□□ 0.94
CHD6Q8TD26 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.92■□□□□ 0.94
CHD6Q8TD26 AL139393.2-201ENST00000608721 2025 ntBASIC20.92■□□□□ 0.94
CHD6Q8TD26 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHD6Q8TD26 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.91■□□□□ 0.94
CHD6Q8TD26 AC008550.1-201ENST00000511500 884 ntBASIC20.91■□□□□ 0.94
CHD6Q8TD26 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.91■□□□□ 0.94
CHD6Q8TD26 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD6Q8TD26 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms