Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
SHKBP1Q8TBC3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHKBP1Q8TBC3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
SHKBP1Q8TBC3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.86■■□□□ 1.41
SHKBP1Q8TBC3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SHKBP1Q8TBC3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHKBP1Q8TBC3 AC105265.2-201ENST00000467189 838 ntBASIC23.86■■□□□ 1.41
SHKBP1Q8TBC3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.86■■□□□ 1.41
SHKBP1Q8TBC3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHKBP1Q8TBC3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.86■■□□□ 1.41
SHKBP1Q8TBC3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SHKBP1Q8TBC3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHKBP1Q8TBC3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHKBP1Q8TBC3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.84■■□□□ 1.41
SHKBP1Q8TBC3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
SHKBP1Q8TBC3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.84■■□□□ 1.41
SHKBP1Q8TBC3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHKBP1Q8TBC3 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.84■■□□□ 1.41
SHKBP1Q8TBC3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.84■■□□□ 1.41
SHKBP1Q8TBC3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHKBP1Q8TBC3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SHKBP1Q8TBC3 C17orf82-201ENST00000623772 1530 ntBASIC23.84■■□□□ 1.41
SHKBP1Q8TBC3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SHKBP1Q8TBC3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SHKBP1Q8TBC3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
SHKBP1Q8TBC3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SHKBP1Q8TBC3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SHKBP1Q8TBC3 HLA-L-211ENST00000482052 1765 ntBASIC23.83■■□□□ 1.4
SHKBP1Q8TBC3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHKBP1Q8TBC3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.82■■□□□ 1.4
SHKBP1Q8TBC3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHKBP1Q8TBC3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHKBP1Q8TBC3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHKBP1Q8TBC3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHKBP1Q8TBC3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SHKBP1Q8TBC3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SHKBP1Q8TBC3 AC026271.2-201ENST00000428091 497 ntBASIC23.82■■□□□ 1.4
SHKBP1Q8TBC3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.82■■□□□ 1.4
SHKBP1Q8TBC3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHKBP1Q8TBC3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SHKBP1Q8TBC3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SHKBP1Q8TBC3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.81■■□□□ 1.4
SHKBP1Q8TBC3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.81■■□□□ 1.4
SHKBP1Q8TBC3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
SHKBP1Q8TBC3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SHKBP1Q8TBC3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHKBP1Q8TBC3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHKBP1Q8TBC3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.81■■□□□ 1.4
SHKBP1Q8TBC3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHKBP1Q8TBC3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.81■■□□□ 1.4
SHKBP1Q8TBC3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SHKBP1Q8TBC3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SHKBP1Q8TBC3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SHKBP1Q8TBC3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.8■■□□□ 1.4
SHKBP1Q8TBC3 AC091305.1-201ENST00000479476 895 ntBASIC23.8■■□□□ 1.4
SHKBP1Q8TBC3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.8■■□□□ 1.4
SHKBP1Q8TBC3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.8■■□□□ 1.4
SHKBP1Q8TBC3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.8■■□□□ 1.4
SHKBP1Q8TBC3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SHKBP1Q8TBC3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SHKBP1Q8TBC3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHKBP1Q8TBC3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SHKBP1Q8TBC3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.79■■□□□ 1.4
SHKBP1Q8TBC3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SHKBP1Q8TBC3 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.79■■□□□ 1.4
SHKBP1Q8TBC3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.78■■□□□ 1.4
SHKBP1Q8TBC3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.78■■□□□ 1.4
SHKBP1Q8TBC3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SHKBP1Q8TBC3 AL138724.1-201ENST00000606771 1088 ntBASIC23.78■■□□□ 1.4
SHKBP1Q8TBC3 AC011298.3-201ENST00000615796 283 ntBASIC23.78■■□□□ 1.4
SHKBP1Q8TBC3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SHKBP1Q8TBC3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHKBP1Q8TBC3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHKBP1Q8TBC3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHKBP1Q8TBC3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.78■■□□□ 1.4
SHKBP1Q8TBC3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 AL161729.1-201ENST00000604104 1402 ntBASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 AC006455.2-201ENST00000429931 906 ntBASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms