Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 AC092028.1-203ENST00000608262 953 ntBASIC22.31■■□□□ 1.16
HMGCLL1Q8TB92 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCLL1Q8TB92 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
HMGCLL1Q8TB92 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
HMGCLL1Q8TB92 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLL1Q8TB92 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLL1Q8TB92 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLL1Q8TB92 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.3■■□□□ 1.16
HMGCLL1Q8TB92 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.3■■□□□ 1.16
HMGCLL1Q8TB92 SNX5-217ENST00000606557 1087 ntBASIC22.3■■□□□ 1.16
HMGCLL1Q8TB92 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLL1Q8TB92 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLL1Q8TB92 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
HMGCLL1Q8TB92 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLL1Q8TB92 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
HMGCLL1Q8TB92 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.29■■□□□ 1.16
HMGCLL1Q8TB92 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCLL1Q8TB92 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCLL1Q8TB92 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.29■■□□□ 1.16
HMGCLL1Q8TB92 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.29■■□□□ 1.16
HMGCLL1Q8TB92 GUSBP5-201ENST00000418136 578 ntBASIC22.29■■□□□ 1.16
HMGCLL1Q8TB92 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.29■■□□□ 1.16
HMGCLL1Q8TB92 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCLL1Q8TB92 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCLL1Q8TB92 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCLL1Q8TB92 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCLL1Q8TB92 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCLL1Q8TB92 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.28■■□□□ 1.16
HMGCLL1Q8TB92 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
HMGCLL1Q8TB92 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCLL1Q8TB92 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.28■■□□□ 1.16
HMGCLL1Q8TB92 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.28■■□□□ 1.16
HMGCLL1Q8TB92 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCLL1Q8TB92 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCLL1Q8TB92 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
HMGCLL1Q8TB92 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
HMGCLL1Q8TB92 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCLL1Q8TB92 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCLL1Q8TB92 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HMGCLL1Q8TB92 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.26■■□□□ 1.15
HMGCLL1Q8TB92 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.25■■□□□ 1.15
HMGCLL1Q8TB92 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
HMGCLL1Q8TB92 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HMGCLL1Q8TB92 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HMGCLL1Q8TB92 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HMGCLL1Q8TB92 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.25■■□□□ 1.15
HMGCLL1Q8TB92 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HMGCLL1Q8TB92 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
HMGCLL1Q8TB92 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HMGCLL1Q8TB92 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
HMGCLL1Q8TB92 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HMGCLL1Q8TB92 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HMGCLL1Q8TB92 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HMGCLL1Q8TB92 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.24■■□□□ 1.15
HMGCLL1Q8TB92 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HMGCLL1Q8TB92 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.24■■□□□ 1.15
HMGCLL1Q8TB92 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.24■■□□□ 1.15
HMGCLL1Q8TB92 MIR6722-201ENST00000617286 78 ntBASIC22.24■■□□□ 1.15
HMGCLL1Q8TB92 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HMGCLL1Q8TB92 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HMGCLL1Q8TB92 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HMGCLL1Q8TB92 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.24■■□□□ 1.15
HMGCLL1Q8TB92 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HMGCLL1Q8TB92 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HMGCLL1Q8TB92 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms