Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 AC022211.4-201ENST00000625094 2161 ntBASIC14.44□□□□□ -0.1
SVIPQ8NHG7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 LINC01960-201ENST00000563759 1884 ntBASIC14.44□□□□□ -0.1
SVIPQ8NHG7 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SVIPQ8NHG7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SVIPQ8NHG7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SVIPQ8NHG7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SVIPQ8NHG7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.43□□□□□ -0.1
SVIPQ8NHG7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SVIPQ8NHG7 AL137060.1-201ENST00000618151 2648 ntBASIC14.43□□□□□ -0.1
SVIPQ8NHG7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SVIPQ8NHG7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SVIPQ8NHG7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC14.43□□□□□ -0.1
SVIPQ8NHG7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SVIPQ8NHG7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.43□□□□□ -0.1
SVIPQ8NHG7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SVIPQ8NHG7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.42□□□□□ -0.1
SVIPQ8NHG7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SVIPQ8NHG7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 PLK5-205ENST00000642079 1969 ntBASIC14.4□□□□□ -0.1
SVIPQ8NHG7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SVIPQ8NHG7 AL671710.1-201ENST00000610245 2349 ntBASIC14.4□□□□□ -0.11
SVIPQ8NHG7 AL359183.1-201ENST00000623796 2132 ntBASIC14.39□□□□□ -0.11
SVIPQ8NHG7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SVIPQ8NHG7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SVIPQ8NHG7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms