Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
COL22A1Q8NFW1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
COL22A1Q8NFW1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC30.95■■■□□ 2.54
COL22A1Q8NFW1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC30.95■■■□□ 2.54
COL22A1Q8NFW1 AC080038.1-201ENST00000611274 1154 ntBASIC30.95■■■□□ 2.54
COL22A1Q8NFW1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
COL22A1Q8NFW1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC30.94■■■□□ 2.54
COL22A1Q8NFW1 CDCA4P2-201ENST00000441182 718 ntBASIC30.94■■■□□ 2.54
COL22A1Q8NFW1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC30.94■■■□□ 2.54
COL22A1Q8NFW1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC30.94■■■□□ 2.54
COL22A1Q8NFW1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
COL22A1Q8NFW1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
COL22A1Q8NFW1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
COL22A1Q8NFW1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC30.93■■■□□ 2.54
COL22A1Q8NFW1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
COL22A1Q8NFW1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC30.93■■■□□ 2.54
COL22A1Q8NFW1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
COL22A1Q8NFW1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC30.92■■■□□ 2.54
COL22A1Q8NFW1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC30.92■■■□□ 2.54
COL22A1Q8NFW1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
COL22A1Q8NFW1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC30.92■■■□□ 2.54
COL22A1Q8NFW1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC30.91■■■□□ 2.54
COL22A1Q8NFW1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
COL22A1Q8NFW1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
COL22A1Q8NFW1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC30.9■■■□□ 2.54
COL22A1Q8NFW1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC30.9■■■□□ 2.54
COL22A1Q8NFW1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
COL22A1Q8NFW1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL22A1Q8NFW1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC30.9■■■□□ 2.54
COL22A1Q8NFW1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL22A1Q8NFW1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
COL22A1Q8NFW1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
COL22A1Q8NFW1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC30.89■■■□□ 2.54
COL22A1Q8NFW1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL22A1Q8NFW1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
COL22A1Q8NFW1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
COL22A1Q8NFW1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
COL22A1Q8NFW1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC30.89■■■□□ 2.54
COL22A1Q8NFW1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC30.89■■■□□ 2.54
COL22A1Q8NFW1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
COL22A1Q8NFW1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL22A1Q8NFW1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC30.88■■■□□ 2.53
COL22A1Q8NFW1 ERN1-208ENST00000606895 2068 ntBASIC30.88■■■□□ 2.53
COL22A1Q8NFW1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.88■■■□□ 2.53
COL22A1Q8NFW1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.88■■■□□ 2.53
COL22A1Q8NFW1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL22A1Q8NFW1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
COL22A1Q8NFW1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
COL22A1Q8NFW1 MIR6089-201ENST00000616698 64 ntBASIC30.87■■■□□ 2.53
COL22A1Q8NFW1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL22A1Q8NFW1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
COL22A1Q8NFW1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.87■■■□□ 2.53
COL22A1Q8NFW1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30.87■■■□□ 2.53
COL22A1Q8NFW1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.87■■■□□ 2.53
COL22A1Q8NFW1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.87■■■□□ 2.53
COL22A1Q8NFW1 LINC02228-203ENST00000641970 1355 ntBASIC30.87■■■□□ 2.53
COL22A1Q8NFW1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.87■■■□□ 2.53
COL22A1Q8NFW1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC30.87■■■□□ 2.53
COL22A1Q8NFW1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
COL22A1Q8NFW1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
COL22A1Q8NFW1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
COL22A1Q8NFW1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
COL22A1Q8NFW1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
COL22A1Q8NFW1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.85■■■□□ 2.53
COL22A1Q8NFW1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.85■■■□□ 2.53
COL22A1Q8NFW1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL22A1Q8NFW1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL22A1Q8NFW1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL22A1Q8NFW1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC30.85■■■□□ 2.53
COL22A1Q8NFW1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL22A1Q8NFW1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC30.85■■■□□ 2.53
COL22A1Q8NFW1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL22A1Q8NFW1 GAS2L1P2-201ENST00000436355 1356 ntBASIC30.85■■■□□ 2.53
COL22A1Q8NFW1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
COL22A1Q8NFW1 NT5C3AP1-201ENST00000394500 1012 ntBASIC30.84■■■□□ 2.53
COL22A1Q8NFW1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC30.84■■■□□ 2.53
COL22A1Q8NFW1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC30.84■■■□□ 2.53
COL22A1Q8NFW1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
COL22A1Q8NFW1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC30.84■■■□□ 2.53
COL22A1Q8NFW1 AL355802.2-201ENST00000402069 882 ntBASIC30.84■■■□□ 2.53
COL22A1Q8NFW1 PPP1R14BP3-201ENST00000509033 445 ntBASIC30.84■■■□□ 2.53
COL22A1Q8NFW1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC30.84■■■□□ 2.53
COL22A1Q8NFW1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
COL22A1Q8NFW1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
COL22A1Q8NFW1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
COL22A1Q8NFW1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC30.83■■■□□ 2.53
COL22A1Q8NFW1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC30.83■■■□□ 2.53
COL22A1Q8NFW1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms