Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK2A3Q8NEV1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK2A3Q8NEV1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.67■□□□□ 0.74
CSNK2A3Q8NEV1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK2A3Q8NEV1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK2A3Q8NEV1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK2A3Q8NEV1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.66■□□□□ 0.74
CSNK2A3Q8NEV1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK2A3Q8NEV1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK2A3Q8NEV1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.65■□□□□ 0.74
CSNK2A3Q8NEV1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.65■□□□□ 0.74
CSNK2A3Q8NEV1 AL031848.2-201ENST00000607670 837 ntBASIC19.65■□□□□ 0.74
CSNK2A3Q8NEV1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK2A3Q8NEV1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK2A3Q8NEV1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSNK2A3Q8NEV1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSNK2A3Q8NEV1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSNK2A3Q8NEV1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CSNK2A3Q8NEV1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.64■□□□□ 0.73
CSNK2A3Q8NEV1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.64■□□□□ 0.73
CSNK2A3Q8NEV1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.64■□□□□ 0.73
CSNK2A3Q8NEV1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.64■□□□□ 0.73
CSNK2A3Q8NEV1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK2A3Q8NEV1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CSNK2A3Q8NEV1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.64■□□□□ 0.73
CSNK2A3Q8NEV1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK2A3Q8NEV1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK2A3Q8NEV1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK2A3Q8NEV1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CSNK2A3Q8NEV1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK2A3Q8NEV1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK2A3Q8NEV1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK2A3Q8NEV1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK2A3Q8NEV1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.62■□□□□ 0.73
CSNK2A3Q8NEV1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK2A3Q8NEV1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.62■□□□□ 0.73
CSNK2A3Q8NEV1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK2A3Q8NEV1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK2A3Q8NEV1 ALDH1A3-203ENST00000557963 1670 ntBASIC19.62■□□□□ 0.73
CSNK2A3Q8NEV1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.62■□□□□ 0.73
CSNK2A3Q8NEV1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK2A3Q8NEV1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK2A3Q8NEV1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CSNK2A3Q8NEV1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK2A3Q8NEV1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 AC079834.2-201ENST00000609776 1949 ntBASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 AC004448.1-201ENST00000458332 883 ntBASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK2A3Q8NEV1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 AC137630.3-201ENST00000607245 391 ntBASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK2A3Q8NEV1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK2A3Q8NEV1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK2A3Q8NEV1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK2A3Q8NEV1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK2A3Q8NEV1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK2A3Q8NEV1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK2A3Q8NEV1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK2A3Q8NEV1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK2A3Q8NEV1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK2A3Q8NEV1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.59■□□□□ 0.73
CSNK2A3Q8NEV1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK2A3Q8NEV1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CSNK2A3Q8NEV1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CSNK2A3Q8NEV1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CSNK2A3Q8NEV1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms