Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
CFAP43Q8NDM7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
CFAP43Q8NDM7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
CFAP43Q8NDM7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC35.95■■■■□ 3.34
CFAP43Q8NDM7 YBX1P1-201ENST00000445822 960 ntBASIC35.94■■■■□ 3.34
CFAP43Q8NDM7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC35.94■■■■□ 3.34
CFAP43Q8NDM7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC35.94■■■■□ 3.34
CFAP43Q8NDM7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC35.94■■■■□ 3.34
CFAP43Q8NDM7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
CFAP43Q8NDM7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
CFAP43Q8NDM7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
CFAP43Q8NDM7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC35.94■■■■□ 3.34
CFAP43Q8NDM7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
CFAP43Q8NDM7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC35.93■■■■□ 3.34
CFAP43Q8NDM7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC35.93■■■■□ 3.34
CFAP43Q8NDM7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC35.93■■■■□ 3.34
CFAP43Q8NDM7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC35.93■■■■□ 3.34
CFAP43Q8NDM7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC35.93■■■■□ 3.34
CFAP43Q8NDM7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CFAP43Q8NDM7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CFAP43Q8NDM7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CFAP43Q8NDM7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CFAP43Q8NDM7 AC027612.3-201ENST00000413684 1047 ntBASIC35.92■■■■□ 3.34
CFAP43Q8NDM7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC35.92■■■■□ 3.34
CFAP43Q8NDM7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
CFAP43Q8NDM7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC35.91■■■■□ 3.34
CFAP43Q8NDM7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC35.91■■■■□ 3.34
CFAP43Q8NDM7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
CFAP43Q8NDM7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
CFAP43Q8NDM7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
CFAP43Q8NDM7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC35.91■■■■□ 3.34
CFAP43Q8NDM7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC35.91■■■■□ 3.34
CFAP43Q8NDM7 MPST-208ENST00000628507 698 ntTSL 5 BASIC35.91■■■■□ 3.34
CFAP43Q8NDM7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
CFAP43Q8NDM7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
CFAP43Q8NDM7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
CFAP43Q8NDM7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC35.89■■■■□ 3.34
CFAP43Q8NDM7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
CFAP43Q8NDM7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC35.89■■■■□ 3.34
CFAP43Q8NDM7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
CFAP43Q8NDM7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
CFAP43Q8NDM7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC35.88■■■■□ 3.34
CFAP43Q8NDM7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC35.88■■■■□ 3.34
CFAP43Q8NDM7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC35.88■■■■□ 3.34
CFAP43Q8NDM7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC35.88■■■■□ 3.34
CFAP43Q8NDM7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
CFAP43Q8NDM7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC35.88■■■■□ 3.33
CFAP43Q8NDM7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC35.88■■■■□ 3.33
CFAP43Q8NDM7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC35.88■■■■□ 3.33
CFAP43Q8NDM7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
CFAP43Q8NDM7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC35.88■■■■□ 3.33
CFAP43Q8NDM7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC35.88■■■■□ 3.33
CFAP43Q8NDM7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC35.88■■■■□ 3.33
CFAP43Q8NDM7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
CFAP43Q8NDM7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
CFAP43Q8NDM7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
CFAP43Q8NDM7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC35.88■■■■□ 3.33
CFAP43Q8NDM7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC35.87■■■■□ 3.33
CFAP43Q8NDM7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
CFAP43Q8NDM7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC35.87■■■■□ 3.33
CFAP43Q8NDM7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
CFAP43Q8NDM7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
CFAP43Q8NDM7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC35.87■■■■□ 3.33
CFAP43Q8NDM7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
CFAP43Q8NDM7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC35.86■■■■□ 3.33
CFAP43Q8NDM7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC35.86■■■■□ 3.33
CFAP43Q8NDM7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
CFAP43Q8NDM7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
CFAP43Q8NDM7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC35.85■■■■□ 3.33
CFAP43Q8NDM7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC35.85■■■■□ 3.33
CFAP43Q8NDM7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC35.85■■■■□ 3.33
CFAP43Q8NDM7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC35.85■■■■□ 3.33
CFAP43Q8NDM7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
CFAP43Q8NDM7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC35.84■■■■□ 3.33
CFAP43Q8NDM7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC35.84■■■■□ 3.33
CFAP43Q8NDM7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
CFAP43Q8NDM7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC35.84■■■■□ 3.33
CFAP43Q8NDM7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC35.84■■■■□ 3.33
CFAP43Q8NDM7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC35.84■■■■□ 3.33
CFAP43Q8NDM7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC35.84■■■■□ 3.33
CFAP43Q8NDM7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC35.84■■■■□ 3.33
CFAP43Q8NDM7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC35.83■■■■□ 3.33
CFAP43Q8NDM7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
CFAP43Q8NDM7 C17orf82-201ENST00000623772 1530 ntBASIC35.83■■■■□ 3.33
CFAP43Q8NDM7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC35.83■■■■□ 3.33
CFAP43Q8NDM7 BX842568.3-201ENST00000418104 571 ntBASIC35.83■■■■□ 3.33
CFAP43Q8NDM7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC35.83■■■■□ 3.33
CFAP43Q8NDM7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC35.83■■■■□ 3.33
CFAP43Q8NDM7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC35.83■■■■□ 3.33
CFAP43Q8NDM7 AL022069.1-201ENST00000568025 1636 ntBASIC35.82■■■■□ 3.33
CFAP43Q8NDM7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC35.82■■■■□ 3.33
CFAP43Q8NDM7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.33
CFAP43Q8NDM7 AC233992.3-201ENST00000607491 485 ntBASIC35.82■■■■□ 3.33
CFAP43Q8NDM7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
CFAP43Q8NDM7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC35.82■■■■□ 3.32
CFAP43Q8NDM7 HES6-206ENST00000409574 738 ntTSL 2 BASIC35.81■■■■□ 3.32
CFAP43Q8NDM7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC35.81■■■■□ 3.32
CFAP43Q8NDM7 HLA-L-211ENST00000482052 1765 ntBASIC35.81■■■■□ 3.32
CFAP43Q8NDM7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC35.81■■■■□ 3.32
CFAP43Q8NDM7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC35.81■■■■□ 3.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms