Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
SMRP1Q8NCR6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.79■■□□□ 1.4
SMRP1Q8NCR6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
SMRP1Q8NCR6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMRP1Q8NCR6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.78■■□□□ 1.4
SMRP1Q8NCR6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMRP1Q8NCR6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.78■■□□□ 1.4
SMRP1Q8NCR6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.78■■□□□ 1.4
SMRP1Q8NCR6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMRP1Q8NCR6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.78■■□□□ 1.4
SMRP1Q8NCR6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMRP1Q8NCR6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.78■■□□□ 1.4
SMRP1Q8NCR6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.78■■□□□ 1.4
SMRP1Q8NCR6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMRP1Q8NCR6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.77■■□□□ 1.4
SMRP1Q8NCR6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.77■■□□□ 1.4
SMRP1Q8NCR6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.77■■□□□ 1.4
SMRP1Q8NCR6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.77■■□□□ 1.4
SMRP1Q8NCR6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.77■■□□□ 1.4
SMRP1Q8NCR6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMRP1Q8NCR6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMRP1Q8NCR6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMRP1Q8NCR6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.77■■□□□ 1.4
SMRP1Q8NCR6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMRP1Q8NCR6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SMRP1Q8NCR6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.76■■□□□ 1.39
SMRP1Q8NCR6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.76■■□□□ 1.39
SMRP1Q8NCR6 KRT18P14-201ENST00000534205 1250 ntBASIC23.76■■□□□ 1.39
SMRP1Q8NCR6 TERF1P2-201ENST00000583350 1212 ntBASIC23.76■■□□□ 1.39
SMRP1Q8NCR6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMRP1Q8NCR6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMRP1Q8NCR6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMRP1Q8NCR6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SMRP1Q8NCR6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMRP1Q8NCR6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.75■■□□□ 1.39
SMRP1Q8NCR6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMRP1Q8NCR6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.75■■□□□ 1.39
SMRP1Q8NCR6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMRP1Q8NCR6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SMRP1Q8NCR6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.75■■□□□ 1.39
SMRP1Q8NCR6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SMRP1Q8NCR6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SMRP1Q8NCR6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMRP1Q8NCR6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMRP1Q8NCR6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMRP1Q8NCR6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMRP1Q8NCR6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.74■■□□□ 1.39
SMRP1Q8NCR6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SMRP1Q8NCR6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SMRP1Q8NCR6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SMRP1Q8NCR6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.74■■□□□ 1.39
SMRP1Q8NCR6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SMRP1Q8NCR6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SMRP1Q8NCR6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.73■■□□□ 1.39
SMRP1Q8NCR6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.73■■□□□ 1.39
SMRP1Q8NCR6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SMRP1Q8NCR6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SMRP1Q8NCR6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
SMRP1Q8NCR6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SMRP1Q8NCR6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
SMRP1Q8NCR6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SMRP1Q8NCR6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMRP1Q8NCR6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMRP1Q8NCR6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMRP1Q8NCR6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.72■■□□□ 1.39
SMRP1Q8NCR6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.72■■□□□ 1.39
SMRP1Q8NCR6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMRP1Q8NCR6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMRP1Q8NCR6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMRP1Q8NCR6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SMRP1Q8NCR6 LINC02228-203ENST00000641970 1355 ntBASIC23.71■■□□□ 1.39
SMRP1Q8NCR6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMRP1Q8NCR6 MIR6089-201ENST00000616698 64 ntBASIC23.71■■□□□ 1.39
SMRP1Q8NCR6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.71■■□□□ 1.39
SMRP1Q8NCR6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SMRP1Q8NCR6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
SMRP1Q8NCR6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.7■■□□□ 1.38
SMRP1Q8NCR6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMRP1Q8NCR6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.7■■□□□ 1.38
SMRP1Q8NCR6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
SMRP1Q8NCR6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMRP1Q8NCR6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMRP1Q8NCR6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMRP1Q8NCR6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.69■■□□□ 1.38
SMRP1Q8NCR6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.69■■□□□ 1.38
SMRP1Q8NCR6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SMRP1Q8NCR6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.69■■□□□ 1.38
SMRP1Q8NCR6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.69■■□□□ 1.38
SMRP1Q8NCR6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.69■■□□□ 1.38
SMRP1Q8NCR6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMRP1Q8NCR6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMRP1Q8NCR6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
SMRP1Q8NCR6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SMRP1Q8NCR6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.68■■□□□ 1.38
SMRP1Q8NCR6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.68■■□□□ 1.38
SMRP1Q8NCR6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMRP1Q8NCR6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMRP1Q8NCR6 AC141586.4-201ENST00000624558 1573 ntBASIC23.68■■□□□ 1.38
SMRP1Q8NCR6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.67■■□□□ 1.38
SMRP1Q8NCR6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms