Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SIX5Q8N196 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.3■■□□□ 1.32
SIX5Q8N196 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.3■■□□□ 1.32
SIX5Q8N196 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.3■■□□□ 1.32
SIX5Q8N196 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SIX5Q8N196 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SIX5Q8N196 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SIX5Q8N196 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.3■■□□□ 1.32
SIX5Q8N196 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SIX5Q8N196 AC142086.6-201ENST00000621154 1765 ntBASIC23.29■■□□□ 1.32
SIX5Q8N196 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SIX5Q8N196 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SIX5Q8N196 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SIX5Q8N196 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.29■■□□□ 1.32
SIX5Q8N196 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SIX5Q8N196 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SIX5Q8N196 pRNA.6-201ENST00000610482 90 ntBASIC23.29■■□□□ 1.32
SIX5Q8N196 pRNA.5-201ENST00000612139 90 ntBASIC23.29■■□□□ 1.32
SIX5Q8N196 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.29■■□□□ 1.32
SIX5Q8N196 pRNA.11-201ENST00000618423 90 ntBASIC23.29■■□□□ 1.32
SIX5Q8N196 pRNA.13-201ENST00000619112 90 ntBASIC23.29■■□□□ 1.32
SIX5Q8N196 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SIX5Q8N196 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SIX5Q8N196 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SIX5Q8N196 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SIX5Q8N196 HLA-L-209ENST00000420110 1011 ntBASIC23.28■■□□□ 1.32
SIX5Q8N196 CCDC92B-201ENST00000575506 885 ntBASIC23.28■■□□□ 1.32
SIX5Q8N196 NTF6G-201ENST00000591094 616 ntBASIC23.28■■□□□ 1.32
SIX5Q8N196 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SIX5Q8N196 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.28■■□□□ 1.32
SIX5Q8N196 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.28■■□□□ 1.32
SIX5Q8N196 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.28■■□□□ 1.32
SIX5Q8N196 AL022069.1-201ENST00000568025 1636 ntBASIC23.28■■□□□ 1.32
SIX5Q8N196 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.28■■□□□ 1.32
SIX5Q8N196 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SIX5Q8N196 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.28■■□□□ 1.32
SIX5Q8N196 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.28■■□□□ 1.32
SIX5Q8N196 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SIX5Q8N196 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.27■■□□□ 1.32
SIX5Q8N196 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SIX5Q8N196 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.27■■□□□ 1.32
SIX5Q8N196 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.27■■□□□ 1.32
SIX5Q8N196 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SIX5Q8N196 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.26■■□□□ 1.31
SIX5Q8N196 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SIX5Q8N196 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SIX5Q8N196 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SIX5Q8N196 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
SIX5Q8N196 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SIX5Q8N196 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.26■■□□□ 1.31
SIX5Q8N196 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
SIX5Q8N196 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
SIX5Q8N196 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SIX5Q8N196 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SIX5Q8N196 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SIX5Q8N196 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIX5Q8N196 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.25■■□□□ 1.31
SIX5Q8N196 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.25■■□□□ 1.31
SIX5Q8N196 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIX5Q8N196 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SIX5Q8N196 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SIX5Q8N196 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.25■■□□□ 1.31
SIX5Q8N196 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.25■■□□□ 1.31
SIX5Q8N196 AC012414.1-201ENST00000556676 535 ntBASIC23.25■■□□□ 1.31
SIX5Q8N196 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.25■■□□□ 1.31
SIX5Q8N196 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SIX5Q8N196 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SIX5Q8N196 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIX5Q8N196 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIX5Q8N196 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIX5Q8N196 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIX5Q8N196 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SIX5Q8N196 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.24■■□□□ 1.31
SIX5Q8N196 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIX5Q8N196 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.24■■□□□ 1.31
SIX5Q8N196 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIX5Q8N196 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIX5Q8N196 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SIX5Q8N196 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIX5Q8N196 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.24■■□□□ 1.31
SIX5Q8N196 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SIX5Q8N196 MIR572-201ENST00000384983 95 ntBASIC23.23■■□□□ 1.31
SIX5Q8N196 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.23■■□□□ 1.31
SIX5Q8N196 IGHV3-19-201ENST00000521488 291 ntBASIC23.23■■□□□ 1.31
SIX5Q8N196 AL354811.1-201ENST00000610286 706 ntBASIC23.23■■□□□ 1.31
SIX5Q8N196 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.23■■□□□ 1.31
SIX5Q8N196 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SIX5Q8N196 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SIX5Q8N196 AC010501.1-201ENST00000606270 1962 ntBASIC23.22■■□□□ 1.31
SIX5Q8N196 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIX5Q8N196 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIX5Q8N196 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.22■■□□□ 1.31
SIX5Q8N196 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SIX5Q8N196 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIX5Q8N196 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIX5Q8N196 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.22■■□□□ 1.31
SIX5Q8N196 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SIX5Q8N196 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.21■■□□□ 1.31
SIX5Q8N196 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.21■■□□□ 1.31
SIX5Q8N196 KRT18P14-201ENST00000534205 1250 ntBASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms