Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 MIR3181-201ENST00000578512 73 ntBASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.53■□□□□ 0.88
RP1L1Q8IWN7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.52■□□□□ 0.88
RP1L1Q8IWN7 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.52■□□□□ 0.88
RP1L1Q8IWN7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RP1L1Q8IWN7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.52■□□□□ 0.88
RP1L1Q8IWN7 KRT18P5-201ENST00000436075 1291 ntBASIC20.52■□□□□ 0.88
RP1L1Q8IWN7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.52■□□□□ 0.88
RP1L1Q8IWN7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RP1L1Q8IWN7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RP1L1Q8IWN7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RP1L1Q8IWN7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RP1L1Q8IWN7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RP1L1Q8IWN7 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.51■□□□□ 0.87
RP1L1Q8IWN7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RP1L1Q8IWN7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.51■□□□□ 0.87
RP1L1Q8IWN7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RP1L1Q8IWN7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RP1L1Q8IWN7 ESRRAP2-201ENST00000418437 1549 ntBASIC20.51■□□□□ 0.87
RP1L1Q8IWN7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RP1L1Q8IWN7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.5■□□□□ 0.87
RP1L1Q8IWN7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.5■□□□□ 0.87
RP1L1Q8IWN7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RP1L1Q8IWN7 AC131274.2-201ENST00000580697 1507 ntBASIC20.5■□□□□ 0.87
RP1L1Q8IWN7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RP1L1Q8IWN7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RP1L1Q8IWN7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.5■□□□□ 0.87
RP1L1Q8IWN7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 AC092803.2-201ENST00000564287 1899 ntBASIC20.49■□□□□ 0.87
RP1L1Q8IWN7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RP1L1Q8IWN7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RP1L1Q8IWN7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.48■□□□□ 0.87
RP1L1Q8IWN7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RP1L1Q8IWN7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.48■□□□□ 0.87
RP1L1Q8IWN7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RP1L1Q8IWN7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RP1L1Q8IWN7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RP1L1Q8IWN7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RP1L1Q8IWN7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RP1L1Q8IWN7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RP1L1Q8IWN7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 AL121749.1-202ENST00000609313 2153 ntBASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 AC027612.3-201ENST00000413684 1047 ntBASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RP1L1Q8IWN7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RP1L1Q8IWN7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RP1L1Q8IWN7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RP1L1Q8IWN7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.46■□□□□ 0.87
RP1L1Q8IWN7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.46■□□□□ 0.87
RP1L1Q8IWN7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.46■□□□□ 0.87
RP1L1Q8IWN7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RP1L1Q8IWN7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.46■□□□□ 0.87
RP1L1Q8IWN7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.46■□□□□ 0.87
RP1L1Q8IWN7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RP1L1Q8IWN7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RP1L1Q8IWN7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms