Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CSMD3Q7Z407 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD3Q7Z407 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.99■□□□□ 0.15
CSMD3Q7Z407 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD3Q7Z407 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC15.99■□□□□ 0.15
CSMD3Q7Z407 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CSMD3Q7Z407 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CSMD3Q7Z407 BX842568.3-201ENST00000418104 571 ntBASIC15.98■□□□□ 0.15
CSMD3Q7Z407 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.98■□□□□ 0.15
CSMD3Q7Z407 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.98■□□□□ 0.15
CSMD3Q7Z407 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD3Q7Z407 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.98■□□□□ 0.15
CSMD3Q7Z407 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.98■□□□□ 0.15
CSMD3Q7Z407 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CSMD3Q7Z407 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.98■□□□□ 0.15
CSMD3Q7Z407 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.98■□□□□ 0.15
CSMD3Q7Z407 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CSMD3Q7Z407 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.97■□□□□ 0.15
CSMD3Q7Z407 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD3Q7Z407 AC010501.1-201ENST00000606270 1962 ntBASIC15.97■□□□□ 0.15
CSMD3Q7Z407 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CSMD3Q7Z407 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CSMD3Q7Z407 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD3Q7Z407 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD3Q7Z407 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
CSMD3Q7Z407 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.97■□□□□ 0.15
CSMD3Q7Z407 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD3Q7Z407 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.96■□□□□ 0.15
CSMD3Q7Z407 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.96■□□□□ 0.15
CSMD3Q7Z407 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.96■□□□□ 0.15
CSMD3Q7Z407 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD3Q7Z407 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD3Q7Z407 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD3Q7Z407 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CSMD3Q7Z407 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD3Q7Z407 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD3Q7Z407 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.96■□□□□ 0.15
CSMD3Q7Z407 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD3Q7Z407 AC012414.1-201ENST00000556676 535 ntBASIC15.96■□□□□ 0.15
CSMD3Q7Z407 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.96■□□□□ 0.15
CSMD3Q7Z407 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD3Q7Z407 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD3Q7Z407 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CSMD3Q7Z407 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CSMD3Q7Z407 SLC6A10P-202ENST00000431994 2058 ntBASIC15.95■□□□□ 0.14
CSMD3Q7Z407 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.95■□□□□ 0.14
CSMD3Q7Z407 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD3Q7Z407 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD3Q7Z407 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.95■□□□□ 0.14
CSMD3Q7Z407 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.95■□□□□ 0.14
CSMD3Q7Z407 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
CSMD3Q7Z407 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CSMD3Q7Z407 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.94■□□□□ 0.14
CSMD3Q7Z407 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD3Q7Z407 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CSMD3Q7Z407 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC15.94■□□□□ 0.14
CSMD3Q7Z407 CROCCP5-201ENST00000436658 830 ntBASIC15.94■□□□□ 0.14
CSMD3Q7Z407 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.94■□□□□ 0.14
CSMD3Q7Z407 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.94■□□□□ 0.14
CSMD3Q7Z407 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.93■□□□□ 0.14
CSMD3Q7Z407 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.93■□□□□ 0.14
CSMD3Q7Z407 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 IGHV3-19-201ENST00000521488 291 ntBASIC15.92■□□□□ 0.14
CSMD3Q7Z407 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.92■□□□□ 0.14
CSMD3Q7Z407 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CSMD3Q7Z407 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.91■□□□□ 0.14
CSMD3Q7Z407 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CSMD3Q7Z407 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSMD3Q7Z407 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CSMD3Q7Z407 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.91■□□□□ 0.14
CSMD3Q7Z407 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.91■□□□□ 0.14
CSMD3Q7Z407 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.91■□□□□ 0.14
CSMD3Q7Z407 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms