Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22■■□□□ 1.11
RNF111Q6ZNA4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
RNF111Q6ZNA4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22■■□□□ 1.11
RNF111Q6ZNA4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22■■□□□ 1.11
RNF111Q6ZNA4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF111Q6ZNA4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22■■□□□ 1.11
RNF111Q6ZNA4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 C1orf229-201ENST00000623686 2258 ntBASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 FOXO3B-201ENST00000395675 1928 ntBASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF111Q6ZNA4 LINC00526-201ENST00000581067 1875 ntBASIC21.98■■□□□ 1.11
RNF111Q6ZNA4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RNF111Q6ZNA4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF111Q6ZNA4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF111Q6ZNA4 AL592295.1-201ENST00000400984 884 ntBASIC21.98■■□□□ 1.11
RNF111Q6ZNA4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF111Q6ZNA4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF111Q6ZNA4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF111Q6ZNA4 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.98■■□□□ 1.11
RNF111Q6ZNA4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF111Q6ZNA4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF111Q6ZNA4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.97■■□□□ 1.11
RNF111Q6ZNA4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF111Q6ZNA4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RNF111Q6ZNA4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RNF111Q6ZNA4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF111Q6ZNA4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF111Q6ZNA4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF111Q6ZNA4 HLA-L-211ENST00000482052 1765 ntBASIC21.97■■□□□ 1.11
RNF111Q6ZNA4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF111Q6ZNA4 KRT8P33-201ENST00000508125 1423 ntBASIC21.97■■□□□ 1.11
RNF111Q6ZNA4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF111Q6ZNA4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RNF111Q6ZNA4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF111Q6ZNA4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF111Q6ZNA4 AC022616.5-201ENST00000518796 181 ntBASIC21.96■■□□□ 1.11
RNF111Q6ZNA4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.96■■□□□ 1.11
RNF111Q6ZNA4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF111Q6ZNA4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF111Q6ZNA4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF111Q6ZNA4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF111Q6ZNA4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF111Q6ZNA4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 YBX1P4-201ENST00000392794 808 ntBASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF111Q6ZNA4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF111Q6ZNA4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RNF111Q6ZNA4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF111Q6ZNA4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF111Q6ZNA4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RNF111Q6ZNA4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF111Q6ZNA4 MIR4508-201ENST00000584178 70 ntBASIC21.94■■□□□ 1.1
RNF111Q6ZNA4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF111Q6ZNA4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF111Q6ZNA4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF111Q6ZNA4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF111Q6ZNA4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF111Q6ZNA4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF111Q6ZNA4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF111Q6ZNA4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF111Q6ZNA4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RNF111Q6ZNA4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF111Q6ZNA4 AC137767.1-201ENST00000602918 1920 ntBASIC21.93■■□□□ 1.1
RNF111Q6ZNA4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF111Q6ZNA4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF111Q6ZNA4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF111Q6ZNA4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF111Q6ZNA4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RNF111Q6ZNA4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF111Q6ZNA4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF111Q6ZNA4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF111Q6ZNA4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
RNF111Q6ZNA4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF111Q6ZNA4 AC103834.1-201ENST00000520383 144 ntBASIC21.91■■□□□ 1.1
RNF111Q6ZNA4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF111Q6ZNA4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.91■■□□□ 1.1
RNF111Q6ZNA4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms