Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R3CPQ6ZMV5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R3CPQ6ZMV5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PPP4R3CPQ6ZMV5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.56■■□□□ 1.68
PPP4R3CPQ6ZMV5 AC092953.2-201ENST00000608000 699 ntBASIC25.56■■□□□ 1.68
PPP4R3CPQ6ZMV5 AC027348.2-201ENST00000624375 642 ntBASIC25.56■■□□□ 1.68
PPP4R3CPQ6ZMV5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PPP4R3CPQ6ZMV5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.55■■□□□ 1.68
PPP4R3CPQ6ZMV5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.55■■□□□ 1.68
PPP4R3CPQ6ZMV5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PPP4R3CPQ6ZMV5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.55■■□□□ 1.68
PPP4R3CPQ6ZMV5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.55■■□□□ 1.68
PPP4R3CPQ6ZMV5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.55■■□□□ 1.68
PPP4R3CPQ6ZMV5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.55■■□□□ 1.68
PPP4R3CPQ6ZMV5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PPP4R3CPQ6ZMV5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.55■■□□□ 1.68
PPP4R3CPQ6ZMV5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R3CPQ6ZMV5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R3CPQ6ZMV5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R3CPQ6ZMV5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R3CPQ6ZMV5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
PPP4R3CPQ6ZMV5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
PPP4R3CPQ6ZMV5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.54■■□□□ 1.68
PPP4R3CPQ6ZMV5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R3CPQ6ZMV5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPP4R3CPQ6ZMV5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPP4R3CPQ6ZMV5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R3CPQ6ZMV5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
PPP4R3CPQ6ZMV5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R3CPQ6ZMV5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PPP4R3CPQ6ZMV5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.52■■□□□ 1.68
PPP4R3CPQ6ZMV5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.52■■□□□ 1.68
PPP4R3CPQ6ZMV5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
PPP4R3CPQ6ZMV5 RPS6P14-201ENST00000425165 719 ntBASIC25.51■■□□□ 1.67
PPP4R3CPQ6ZMV5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PPP4R3CPQ6ZMV5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
PPP4R3CPQ6ZMV5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.51■■□□□ 1.67
PPP4R3CPQ6ZMV5 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.51■■□□□ 1.67
PPP4R3CPQ6ZMV5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.51■■□□□ 1.67
PPP4R3CPQ6ZMV5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R3CPQ6ZMV5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R3CPQ6ZMV5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R3CPQ6ZMV5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PPP4R3CPQ6ZMV5 TSPY9P-201ENST00000440215 945 ntBASIC25.5■■□□□ 1.67
PPP4R3CPQ6ZMV5 TSPY11P-201ENST00000442607 1045 ntBASIC25.5■■□□□ 1.67
PPP4R3CPQ6ZMV5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.5■■□□□ 1.67
PPP4R3CPQ6ZMV5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
PPP4R3CPQ6ZMV5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PPP4R3CPQ6ZMV5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC25.49■■□□□ 1.67
PPP4R3CPQ6ZMV5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.49■■□□□ 1.67
PPP4R3CPQ6ZMV5 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.49■■□□□ 1.67
PPP4R3CPQ6ZMV5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
PPP4R3CPQ6ZMV5 KRT16P3-201ENST00000439127 1283 ntBASIC25.49■■□□□ 1.67
PPP4R3CPQ6ZMV5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.49■■□□□ 1.67
PPP4R3CPQ6ZMV5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PPP4R3CPQ6ZMV5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.49■■□□□ 1.67
PPP4R3CPQ6ZMV5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
PPP4R3CPQ6ZMV5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PPP4R3CPQ6ZMV5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
PPP4R3CPQ6ZMV5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.48■■□□□ 1.67
PPP4R3CPQ6ZMV5 TMF1P1-201ENST00000576058 373 ntBASIC25.48■■□□□ 1.67
PPP4R3CPQ6ZMV5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 AC007919.2-201ENST00000444110 511 ntBASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 AC005972.3-201ENST00000606304 481 ntBASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.47■■□□□ 1.67
PPP4R3CPQ6ZMV5 AC004812.2-201ENST00000611079 2094 ntBASIC25.46■■□□□ 1.67
PPP4R3CPQ6ZMV5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PPP4R3CPQ6ZMV5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.46■■□□□ 1.67
PPP4R3CPQ6ZMV5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PPP4R3CPQ6ZMV5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
PPP4R3CPQ6ZMV5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC25.46■■□□□ 1.67
PPP4R3CPQ6ZMV5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PPP4R3CPQ6ZMV5 AC131212.1-201ENST00000613771 668 ntBASIC25.46■■□□□ 1.67
PPP4R3CPQ6ZMV5 AC006213.5-201ENST00000619673 288 ntBASIC25.46■■□□□ 1.67
PPP4R3CPQ6ZMV5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.46■■□□□ 1.67
PPP4R3CPQ6ZMV5 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PPP4R3CPQ6ZMV5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PPP4R3CPQ6ZMV5 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC25.45■■□□□ 1.66
PPP4R3CPQ6ZMV5 AL355994.1-201ENST00000424379 260 ntBASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms