Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 MIR6089-201ENST00000616698 64 ntBASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 pRNA.11-201ENST00000618423 90 ntBASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 pRNA.13-201ENST00000619112 90 ntBASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
SYCE2Q6PIF2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
SYCE2Q6PIF2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
SYCE2Q6PIF2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SYCE2Q6PIF2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SYCE2Q6PIF2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SYCE2Q6PIF2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
SYCE2Q6PIF2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.87■■□□□ 1.41
SYCE2Q6PIF2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SYCE2Q6PIF2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.87■■□□□ 1.41
SYCE2Q6PIF2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.87■■□□□ 1.41
SYCE2Q6PIF2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SYCE2Q6PIF2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SYCE2Q6PIF2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
SYCE2Q6PIF2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SYCE2Q6PIF2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
SYCE2Q6PIF2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
SYCE2Q6PIF2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SYCE2Q6PIF2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.86■■□□□ 1.41
SYCE2Q6PIF2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SYCE2Q6PIF2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
SYCE2Q6PIF2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SYCE2Q6PIF2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SYCE2Q6PIF2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
SYCE2Q6PIF2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.86■■□□□ 1.41
SYCE2Q6PIF2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SYCE2Q6PIF2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SYCE2Q6PIF2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SYCE2Q6PIF2 AC027612.3-201ENST00000413684 1047 ntBASIC23.85■■□□□ 1.41
SYCE2Q6PIF2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SYCE2Q6PIF2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
SYCE2Q6PIF2 AC092803.2-201ENST00000564287 1899 ntBASIC23.85■■□□□ 1.41
SYCE2Q6PIF2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SYCE2Q6PIF2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SYCE2Q6PIF2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.84■■□□□ 1.41
SYCE2Q6PIF2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE2Q6PIF2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SYCE2Q6PIF2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SYCE2Q6PIF2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SYCE2Q6PIF2 AC004911.1-201ENST00000416316 871 ntBASIC23.84■■□□□ 1.41
SYCE2Q6PIF2 AC123595.1-201ENST00000440769 1046 ntBASIC23.84■■□□□ 1.41
SYCE2Q6PIF2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SYCE2Q6PIF2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
SYCE2Q6PIF2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.84■■□□□ 1.41
SYCE2Q6PIF2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE2Q6PIF2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SYCE2Q6PIF2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.83■■□□□ 1.41
SYCE2Q6PIF2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SYCE2Q6PIF2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SYCE2Q6PIF2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SYCE2Q6PIF2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.83■■□□□ 1.41
SYCE2Q6PIF2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SYCE2Q6PIF2 AL358852.1-201ENST00000623174 1268 ntBASIC23.83■■□□□ 1.41
SYCE2Q6PIF2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SYCE2Q6PIF2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SYCE2Q6PIF2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SYCE2Q6PIF2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYCE2Q6PIF2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
SYCE2Q6PIF2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.82■■□□□ 1.4
SYCE2Q6PIF2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYCE2Q6PIF2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.82■■□□□ 1.4
SYCE2Q6PIF2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.82■■□□□ 1.4
SYCE2Q6PIF2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
SYCE2Q6PIF2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.82■■□□□ 1.4
SYCE2Q6PIF2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYCE2Q6PIF2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE2Q6PIF2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.81■■□□□ 1.4
SYCE2Q6PIF2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.81■■□□□ 1.4
SYCE2Q6PIF2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.81■■□□□ 1.4
SYCE2Q6PIF2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE2Q6PIF2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE2Q6PIF2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYCE2Q6PIF2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYCE2Q6PIF2 ID1-201ENST00000376105 1233 ntBASIC23.8■■□□□ 1.4
SYCE2Q6PIF2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.8■■□□□ 1.4
SYCE2Q6PIF2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.8■■□□□ 1.4
SYCE2Q6PIF2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.8■■□□□ 1.4
SYCE2Q6PIF2 MIR6084-201ENST00000622012 110 ntBASIC23.8■■□□□ 1.4
SYCE2Q6PIF2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SYCE2Q6PIF2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE2Q6PIF2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SYCE2Q6PIF2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.79■■□□□ 1.4
SYCE2Q6PIF2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.79■■□□□ 1.4
SYCE2Q6PIF2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.79■■□□□ 1.4
SYCE2Q6PIF2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.79■■□□□ 1.4
SYCE2Q6PIF2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE2Q6PIF2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.79■■□□□ 1.4
SYCE2Q6PIF2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE2Q6PIF2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.78■■□□□ 1.4
SYCE2Q6PIF2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYCE2Q6PIF2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.78■■□□□ 1.4
SYCE2Q6PIF2 MIR572-201ENST00000384983 95 ntBASIC23.78■■□□□ 1.4
SYCE2Q6PIF2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.78■■□□□ 1.4
SYCE2Q6PIF2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms