Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.73■■□□□ 1.55
CNKSR3Q6P9H4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CNKSR3Q6P9H4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.72■■□□□ 1.55
CNKSR3Q6P9H4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 SLC47A1P1-202ENST00000449666 945 ntBASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 DUX4L2-201ENST00000561772 1275 ntBASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 AL358852.1-201ENST00000623174 1268 ntBASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 DUX4L6-201ENST00000626483 1275 ntBASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 DUX4L1-201ENST00000627662 1275 ntBASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 DUX4L8-201ENST00000629013 1275 ntBASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 DUX4L3-201ENST00000630187 1275 ntBASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 DUX4L7-201ENST00000630678 1275 ntBASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 DUX4L5-201ENST00000630834 1275 ntBASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CNKSR3Q6P9H4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CNKSR3Q6P9H4 AC027612.3-201ENST00000413684 1047 ntBASIC24.7■■□□□ 1.54
CNKSR3Q6P9H4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.7■■□□□ 1.54
CNKSR3Q6P9H4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.7■■□□□ 1.54
CNKSR3Q6P9H4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.7■■□□□ 1.54
CNKSR3Q6P9H4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CNKSR3Q6P9H4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.7■■□□□ 1.54
CNKSR3Q6P9H4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CNKSR3Q6P9H4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CNKSR3Q6P9H4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
CNKSR3Q6P9H4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
CNKSR3Q6P9H4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CNKSR3Q6P9H4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.69■■□□□ 1.54
CNKSR3Q6P9H4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.69■■□□□ 1.54
CNKSR3Q6P9H4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.69■■□□□ 1.54
CNKSR3Q6P9H4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
CNKSR3Q6P9H4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.69■■□□□ 1.54
CNKSR3Q6P9H4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.69■■□□□ 1.54
CNKSR3Q6P9H4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 AC141586.4-201ENST00000624558 1573 ntBASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 AC123595.1-201ENST00000440769 1046 ntBASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CNKSR3Q6P9H4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 AC092437.1-201ENST00000624794 1048 ntBASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CNKSR3Q6P9H4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.66■■□□□ 1.54
CNKSR3Q6P9H4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.66■■□□□ 1.54
CNKSR3Q6P9H4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
CNKSR3Q6P9H4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
CNKSR3Q6P9H4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CNKSR3Q6P9H4 IGHV3-19-201ENST00000521488 291 ntBASIC24.66■■□□□ 1.54
CNKSR3Q6P9H4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.66■■□□□ 1.54
CNKSR3Q6P9H4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.66■■□□□ 1.54
CNKSR3Q6P9H4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CNKSR3Q6P9H4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CNKSR3Q6P9H4 DUSP8P4-201ENST00000399538 1761 ntBASIC24.65■■□□□ 1.54
CNKSR3Q6P9H4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CNKSR3Q6P9H4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.65■■□□□ 1.54
CNKSR3Q6P9H4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CNKSR3Q6P9H4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CNKSR3Q6P9H4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CNKSR3Q6P9H4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.64■■□□□ 1.54
CNKSR3Q6P9H4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CNKSR3Q6P9H4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CNKSR3Q6P9H4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms