Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPUSD3Q6P087 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.73■□□□□ 0.91
RPUSD3Q6P087 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RPUSD3Q6P087 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.73■□□□□ 0.91
RPUSD3Q6P087 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RPUSD3Q6P087 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPUSD3Q6P087 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.73■□□□□ 0.91
RPUSD3Q6P087 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.73■□□□□ 0.91
RPUSD3Q6P087 AC136469.2-201ENST00000623944 1028 ntBASIC20.73■□□□□ 0.91
RPUSD3Q6P087 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPUSD3Q6P087 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.73■□□□□ 0.91
RPUSD3Q6P087 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPUSD3Q6P087 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPUSD3Q6P087 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPUSD3Q6P087 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.72■□□□□ 0.91
RPUSD3Q6P087 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.72■□□□□ 0.91
RPUSD3Q6P087 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.72■□□□□ 0.91
RPUSD3Q6P087 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPUSD3Q6P087 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPUSD3Q6P087 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPUSD3Q6P087 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPUSD3Q6P087 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPUSD3Q6P087 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPUSD3Q6P087 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPUSD3Q6P087 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPUSD3Q6P087 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.71■□□□□ 0.91
RPUSD3Q6P087 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.71■□□□□ 0.91
RPUSD3Q6P087 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPUSD3Q6P087 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPUSD3Q6P087 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
RPUSD3Q6P087 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPUSD3Q6P087 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPUSD3Q6P087 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPUSD3Q6P087 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPUSD3Q6P087 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.7■□□□□ 0.9
RPUSD3Q6P087 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPUSD3Q6P087 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RPUSD3Q6P087 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPUSD3Q6P087 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPUSD3Q6P087 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPUSD3Q6P087 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPUSD3Q6P087 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPUSD3Q6P087 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RPUSD3Q6P087 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPUSD3Q6P087 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPUSD3Q6P087 IRS3P-201ENST00000223076 1006 ntBASIC20.69■□□□□ 0.9
RPUSD3Q6P087 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPUSD3Q6P087 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPUSD3Q6P087 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPUSD3Q6P087 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPUSD3Q6P087 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 AC099791.1-201ENST00000416440 715 ntBASIC20.68■□□□□ 0.9
RPUSD3Q6P087 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 AC008764.7-201ENST00000593779 1081 ntBASIC20.68■□□□□ 0.9
RPUSD3Q6P087 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RPUSD3Q6P087 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPUSD3Q6P087 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.67■□□□□ 0.9
RPUSD3Q6P087 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.67■□□□□ 0.9
RPUSD3Q6P087 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPUSD3Q6P087 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPUSD3Q6P087 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.67■□□□□ 0.9
RPUSD3Q6P087 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RPUSD3Q6P087 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPUSD3Q6P087 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPUSD3Q6P087 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPUSD3Q6P087 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPUSD3Q6P087 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPUSD3Q6P087 BX842568.3-201ENST00000418104 571 ntBASIC20.66■□□□□ 0.9
RPUSD3Q6P087 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.66■□□□□ 0.9
RPUSD3Q6P087 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RPUSD3Q6P087 AC233992.3-201ENST00000607491 485 ntBASIC20.66■□□□□ 0.9
RPUSD3Q6P087 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.66■□□□□ 0.9
RPUSD3Q6P087 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPUSD3Q6P087 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPUSD3Q6P087 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.65■□□□□ 0.9
RPUSD3Q6P087 AC009086.3-201ENST00000623486 1008 ntBASIC20.65■□□□□ 0.9
RPUSD3Q6P087 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms