Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQA1Q5Y7H0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HLA-DQA1Q5Y7H0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.11■□□□□ 0.97
HLA-DQA1Q5Y7H0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DQA1Q5Y7H0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
HLA-DQA1Q5Y7H0 AL356740.2-201ENST00000601559 647 ntBASIC21.1■□□□□ 0.97
HLA-DQA1Q5Y7H0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DQA1Q5Y7H0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DQA1Q5Y7H0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HLA-DQA1Q5Y7H0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
HLA-DQA1Q5Y7H0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQA1Q5Y7H0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.09■□□□□ 0.97
HLA-DQA1Q5Y7H0 AC131212.1-201ENST00000613771 668 ntBASIC21.09■□□□□ 0.97
HLA-DQA1Q5Y7H0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQA1Q5Y7H0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.09■□□□□ 0.97
HLA-DQA1Q5Y7H0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQA1Q5Y7H0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQA1Q5Y7H0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.09■□□□□ 0.97
HLA-DQA1Q5Y7H0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQA1Q5Y7H0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQA1Q5Y7H0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQA1Q5Y7H0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQA1Q5Y7H0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.08■□□□□ 0.97
HLA-DQA1Q5Y7H0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQA1Q5Y7H0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQA1Q5Y7H0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
HLA-DQA1Q5Y7H0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
HLA-DQA1Q5Y7H0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.08■□□□□ 0.96
HLA-DQA1Q5Y7H0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-DQA1Q5Y7H0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 ABCB10P4-201ENST00000566803 2184 ntBASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA1Q5Y7H0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQA1Q5Y7H0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.06■□□□□ 0.96
HLA-DQA1Q5Y7H0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQA1Q5Y7H0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQA1Q5Y7H0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQA1Q5Y7H0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQA1Q5Y7H0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQA1Q5Y7H0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQA1Q5Y7H0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQA1Q5Y7H0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.05■□□□□ 0.96
HLA-DQA1Q5Y7H0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQA1Q5Y7H0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-DQA1Q5Y7H0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.05■□□□□ 0.96
HLA-DQA1Q5Y7H0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQA1Q5Y7H0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HLA-DQA1Q5Y7H0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 AL117332.1-201ENST00000622628 974 ntBASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 AC093323.1-202ENST00000635031 2045 ntBASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.04■□□□□ 0.96
HLA-DQA1Q5Y7H0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DQA1Q5Y7H0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQA1Q5Y7H0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQA1Q5Y7H0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQA1Q5Y7H0 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.02■□□□□ 0.96
HLA-DQA1Q5Y7H0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.02■□□□□ 0.96
HLA-DQA1Q5Y7H0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.02■□□□□ 0.96
HLA-DQA1Q5Y7H0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQA1Q5Y7H0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DQA1Q5Y7H0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HLA-DQA1Q5Y7H0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.01■□□□□ 0.95
HLA-DQA1Q5Y7H0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms