Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC29.06■■■□□ 2.24
RC3H1Q5TC82 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
RC3H1Q5TC82 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.05■■■□□ 2.24
RC3H1Q5TC82 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
RC3H1Q5TC82 AL161729.1-201ENST00000604104 1402 ntBASIC29.05■■■□□ 2.24
RC3H1Q5TC82 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC29.05■■■□□ 2.24
RC3H1Q5TC82 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
RC3H1Q5TC82 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC29.05■■■□□ 2.24
RC3H1Q5TC82 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC29.05■■■□□ 2.24
RC3H1Q5TC82 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
RC3H1Q5TC82 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
RC3H1Q5TC82 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC29.05■■■□□ 2.24
RC3H1Q5TC82 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC29.04■■■□□ 2.24
RC3H1Q5TC82 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.04■■■□□ 2.24
RC3H1Q5TC82 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC29.04■■■□□ 2.24
RC3H1Q5TC82 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC29.04■■■□□ 2.24
RC3H1Q5TC82 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.04■■■□□ 2.24
RC3H1Q5TC82 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
RC3H1Q5TC82 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC29.04■■■□□ 2.24
RC3H1Q5TC82 AICDA-202ENST00000537228 667 ntTSL 5 BASIC29.04■■■□□ 2.24
RC3H1Q5TC82 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC29.04■■■□□ 2.24
RC3H1Q5TC82 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.04■■■□□ 2.24
RC3H1Q5TC82 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC29.04■■■□□ 2.24
RC3H1Q5TC82 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RC3H1Q5TC82 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
RC3H1Q5TC82 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
RC3H1Q5TC82 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC29.03■■■□□ 2.24
RC3H1Q5TC82 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
RC3H1Q5TC82 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
RC3H1Q5TC82 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.03■■■□□ 2.24
RC3H1Q5TC82 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
RC3H1Q5TC82 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
RC3H1Q5TC82 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC29.02■■■□□ 2.24
RC3H1Q5TC82 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC29.02■■■□□ 2.24
RC3H1Q5TC82 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC29.02■■■□□ 2.24
RC3H1Q5TC82 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RC3H1Q5TC82 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RC3H1Q5TC82 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC29.01■■■□□ 2.23
RC3H1Q5TC82 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RC3H1Q5TC82 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC29.01■■■□□ 2.23
RC3H1Q5TC82 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RC3H1Q5TC82 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC29.01■■■□□ 2.23
RC3H1Q5TC82 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.01■■■□□ 2.23
RC3H1Q5TC82 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC29.01■■■□□ 2.23
RC3H1Q5TC82 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC29.01■■■□□ 2.23
RC3H1Q5TC82 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC29.01■■■□□ 2.23
RC3H1Q5TC82 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
RC3H1Q5TC82 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC29■■■□□ 2.23
RC3H1Q5TC82 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
RC3H1Q5TC82 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC29■■■□□ 2.23
RC3H1Q5TC82 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
RC3H1Q5TC82 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29■■■□□ 2.23
RC3H1Q5TC82 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC29■■■□□ 2.23
RC3H1Q5TC82 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC29■■■□□ 2.23
RC3H1Q5TC82 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC29■■■□□ 2.23
RC3H1Q5TC82 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.99■■■□□ 2.23
RC3H1Q5TC82 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.99■■■□□ 2.23
RC3H1Q5TC82 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.99■■■□□ 2.23
RC3H1Q5TC82 MIR572-201ENST00000384983 95 ntBASIC28.99■■■□□ 2.23
RC3H1Q5TC82 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC28.99■■■□□ 2.23
RC3H1Q5TC82 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
RC3H1Q5TC82 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
RC3H1Q5TC82 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.99■■■□□ 2.23
RC3H1Q5TC82 AC141586.4-201ENST00000624558 1573 ntBASIC28.99■■■□□ 2.23
RC3H1Q5TC82 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RC3H1Q5TC82 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
RC3H1Q5TC82 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RC3H1Q5TC82 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.98■■■□□ 2.23
RC3H1Q5TC82 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.98■■■□□ 2.23
RC3H1Q5TC82 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
RC3H1Q5TC82 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.98■■■□□ 2.23
RC3H1Q5TC82 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
RC3H1Q5TC82 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
RC3H1Q5TC82 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC28.98■■■□□ 2.23
RC3H1Q5TC82 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RC3H1Q5TC82 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.98■■■□□ 2.23
RC3H1Q5TC82 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
RC3H1Q5TC82 IGHV3-19-201ENST00000521488 291 ntBASIC28.97■■■□□ 2.23
RC3H1Q5TC82 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC28.97■■■□□ 2.23
RC3H1Q5TC82 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC28.97■■■□□ 2.23
RC3H1Q5TC82 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RC3H1Q5TC82 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RC3H1Q5TC82 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
RC3H1Q5TC82 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
RC3H1Q5TC82 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
RC3H1Q5TC82 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
RC3H1Q5TC82 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.96■■■□□ 2.23
RC3H1Q5TC82 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.96■■■□□ 2.23
RC3H1Q5TC82 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
RC3H1Q5TC82 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
RC3H1Q5TC82 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.95■■■□□ 2.22
RC3H1Q5TC82 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.22
RC3H1Q5TC82 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
RC3H1Q5TC82 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC28.95■■■□□ 2.22
RC3H1Q5TC82 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.95■■■□□ 2.22
RC3H1Q5TC82 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
RC3H1Q5TC82 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.94■■■□□ 2.22
RC3H1Q5TC82 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.94■■■□□ 2.22
RC3H1Q5TC82 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
RC3H1Q5TC82 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms