Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNFT1Q5M7Z0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNFT1Q5M7Z0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNFT1Q5M7Z0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
RNFT1Q5M7Z0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.56■□□□□ 0.88
RNFT1Q5M7Z0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNFT1Q5M7Z0 AP003733.4-201ENST00000623785 1697 ntBASIC20.56■□□□□ 0.88
RNFT1Q5M7Z0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNFT1Q5M7Z0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNFT1Q5M7Z0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNFT1Q5M7Z0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.56■□□□□ 0.88
RNFT1Q5M7Z0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNFT1Q5M7Z0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 AC011298.3-201ENST00000615796 283 ntBASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 AC138932.3-201ENST00000567634 1902 ntBASIC20.55■□□□□ 0.88
RNFT1Q5M7Z0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNFT1Q5M7Z0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNFT1Q5M7Z0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.54■□□□□ 0.88
RNFT1Q5M7Z0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.54■□□□□ 0.88
RNFT1Q5M7Z0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RNFT1Q5M7Z0 AL138724.1-201ENST00000606771 1088 ntBASIC20.54■□□□□ 0.88
RNFT1Q5M7Z0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNFT1Q5M7Z0 AC241377.3-202ENST00000626088 1088 ntBASIC20.54■□□□□ 0.88
RNFT1Q5M7Z0 AC241585.3-202ENST00000628937 1088 ntBASIC20.54■□□□□ 0.88
RNFT1Q5M7Z0 AC245100.8-202ENST00000629247 1058 ntBASIC20.54■□□□□ 0.88
RNFT1Q5M7Z0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNFT1Q5M7Z0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNFT1Q5M7Z0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 RARRES2P6-201ENST00000567333 442 ntBASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.53■□□□□ 0.88
RNFT1Q5M7Z0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNFT1Q5M7Z0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNFT1Q5M7Z0 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.52■□□□□ 0.88
RNFT1Q5M7Z0 AC026271.2-201ENST00000428091 497 ntBASIC20.52■□□□□ 0.88
RNFT1Q5M7Z0 AC091305.1-201ENST00000479476 895 ntBASIC20.52■□□□□ 0.88
RNFT1Q5M7Z0 MIR3181-201ENST00000578512 73 ntBASIC20.52■□□□□ 0.88
RNFT1Q5M7Z0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNFT1Q5M7Z0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 AC008764.7-201ENST00000593779 1081 ntBASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 CA15P2-201ENST00000611168 834 ntBASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 AC009086.3-201ENST00000623486 1008 ntBASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNFT1Q5M7Z0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNFT1Q5M7Z0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNFT1Q5M7Z0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNFT1Q5M7Z0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.49■□□□□ 0.87
RNFT1Q5M7Z0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNFT1Q5M7Z0 AC136469.2-201ENST00000623944 1028 ntBASIC20.49■□□□□ 0.87
RNFT1Q5M7Z0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNFT1Q5M7Z0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RNFT1Q5M7Z0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms