Protein–RNA interactions for Protein: Q3C1V0

MS4A18, Membrane-spanning 4-domains subfamily A member 18, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A18Q3C1V0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A18Q3C1V0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A18Q3C1V0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A18Q3C1V0 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.31■□□□□ 0.84
MS4A18Q3C1V0 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.31■□□□□ 0.84
MS4A18Q3C1V0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A18Q3C1V0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MS4A18Q3C1V0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 DUSP8P5-201ENST00000422884 1815 ntBASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 ANOS2P-203ENST00000472227 1816 ntBASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 MIR6722-201ENST00000617286 78 ntBASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
MS4A18Q3C1V0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A18Q3C1V0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A18Q3C1V0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A18Q3C1V0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.29■□□□□ 0.84
MS4A18Q3C1V0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.29■□□□□ 0.84
MS4A18Q3C1V0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A18Q3C1V0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.29■□□□□ 0.84
MS4A18Q3C1V0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A18Q3C1V0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A18Q3C1V0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A18Q3C1V0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A18Q3C1V0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.29■□□□□ 0.84
MS4A18Q3C1V0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.28■□□□□ 0.84
MS4A18Q3C1V0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
MS4A18Q3C1V0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A18Q3C1V0 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.28■□□□□ 0.84
MS4A18Q3C1V0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A18Q3C1V0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A18Q3C1V0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A18Q3C1V0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A18Q3C1V0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
MS4A18Q3C1V0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.28■□□□□ 0.84
MS4A18Q3C1V0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A18Q3C1V0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A18Q3C1V0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A18Q3C1V0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A18Q3C1V0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A18Q3C1V0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A18Q3C1V0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.27■□□□□ 0.84
MS4A18Q3C1V0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
MS4A18Q3C1V0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.27■□□□□ 0.84
MS4A18Q3C1V0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.27■□□□□ 0.84
MS4A18Q3C1V0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.27■□□□□ 0.83
MS4A18Q3C1V0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
MS4A18Q3C1V0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MS4A18Q3C1V0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
MS4A18Q3C1V0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A18Q3C1V0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A18Q3C1V0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A18Q3C1V0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A18Q3C1V0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.26■□□□□ 0.83
MS4A18Q3C1V0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A18Q3C1V0 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.26■□□□□ 0.83
MS4A18Q3C1V0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.26■□□□□ 0.83
MS4A18Q3C1V0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A18Q3C1V0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A18Q3C1V0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A18Q3C1V0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MS4A18Q3C1V0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MS4A18Q3C1V0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A18Q3C1V0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.25■□□□□ 0.83
MS4A18Q3C1V0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A18Q3C1V0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A18Q3C1V0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A18Q3C1V0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A18Q3C1V0 AC092068.2-201ENST00000590491 1708 ntBASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A18Q3C1V0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A18Q3C1V0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A18Q3C1V0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A18Q3C1V0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A18Q3C1V0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.23■□□□□ 0.83
MS4A18Q3C1V0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms