Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PDS5AQ29RF7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
PDS5AQ29RF7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC27.46■■□□□ 1.99
PDS5AQ29RF7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC27.46■■□□□ 1.99
PDS5AQ29RF7 AC135731.1-201ENST00000569415 2548 ntBASIC27.46■■□□□ 1.99
PDS5AQ29RF7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PDS5AQ29RF7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PDS5AQ29RF7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PDS5AQ29RF7 AC141586.4-201ENST00000624558 1573 ntBASIC27.46■■□□□ 1.99
PDS5AQ29RF7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PDS5AQ29RF7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC27.45■■□□□ 1.99
PDS5AQ29RF7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
PDS5AQ29RF7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27.45■■□□□ 1.99
PDS5AQ29RF7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC27.45■■□□□ 1.99
PDS5AQ29RF7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.45■■□□□ 1.99
PDS5AQ29RF7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PDS5AQ29RF7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
PDS5AQ29RF7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PDS5AQ29RF7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
PDS5AQ29RF7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC27.45■■□□□ 1.98
PDS5AQ29RF7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PDS5AQ29RF7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PDS5AQ29RF7 AC142381.2-201ENST00000566120 298 ntBASIC27.44■■□□□ 1.98
PDS5AQ29RF7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.44■■□□□ 1.98
PDS5AQ29RF7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PDS5AQ29RF7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
PDS5AQ29RF7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.44■■□□□ 1.98
PDS5AQ29RF7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDS5AQ29RF7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
PDS5AQ29RF7 MIR939-201ENST00000401314 82 ntBASIC27.42■■□□□ 1.98
PDS5AQ29RF7 AC006455.2-201ENST00000429931 906 ntBASIC27.42■■□□□ 1.98
PDS5AQ29RF7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.42■■□□□ 1.98
PDS5AQ29RF7 AP001330.3-201ENST00000520123 633 ntBASIC27.42■■□□□ 1.98
PDS5AQ29RF7 MIR4767-201ENST00000582827 78 ntBASIC27.42■■□□□ 1.98
PDS5AQ29RF7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PDS5AQ29RF7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PDS5AQ29RF7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC27.42■■□□□ 1.98
PDS5AQ29RF7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
PDS5AQ29RF7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PDS5AQ29RF7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.41■■□□□ 1.98
PDS5AQ29RF7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.41■■□□□ 1.98
PDS5AQ29RF7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC27.41■■□□□ 1.98
PDS5AQ29RF7 AC009086.3-201ENST00000623486 1008 ntBASIC27.41■■□□□ 1.98
PDS5AQ29RF7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PDS5AQ29RF7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PDS5AQ29RF7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.41■■□□□ 1.98
PDS5AQ29RF7 AC136469.2-201ENST00000623944 1028 ntBASIC27.41■■□□□ 1.98
PDS5AQ29RF7 AL136967.2-201ENST00000623968 743 ntBASIC27.41■■□□□ 1.98
PDS5AQ29RF7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
PDS5AQ29RF7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PDS5AQ29RF7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PDS5AQ29RF7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PDS5AQ29RF7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.4■■□□□ 1.98
PDS5AQ29RF7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.4■■□□□ 1.98
PDS5AQ29RF7 GRAMD4P4-201ENST00000613563 1115 ntBASIC27.4■■□□□ 1.98
PDS5AQ29RF7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PDS5AQ29RF7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PDS5AQ29RF7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PDS5AQ29RF7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.39■■□□□ 1.97
PDS5AQ29RF7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PDS5AQ29RF7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.38■■□□□ 1.97
PDS5AQ29RF7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PDS5AQ29RF7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PDS5AQ29RF7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PDS5AQ29RF7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PDS5AQ29RF7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
PDS5AQ29RF7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
PDS5AQ29RF7 HES6-206ENST00000409574 738 ntTSL 2 BASIC27.38■■□□□ 1.97
PDS5AQ29RF7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC27.38■■□□□ 1.97
PDS5AQ29RF7 AF213884.3-201ENST00000563833 479 ntBASIC27.38■■□□□ 1.97
PDS5AQ29RF7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PDS5AQ29RF7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PDS5AQ29RF7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PDS5AQ29RF7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC27.37■■□□□ 1.97
PDS5AQ29RF7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PDS5AQ29RF7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
PDS5AQ29RF7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PDS5AQ29RF7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
PDS5AQ29RF7 MIR3181-201ENST00000578512 73 ntBASIC27.37■■□□□ 1.97
PDS5AQ29RF7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
PDS5AQ29RF7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC27.37■■□□□ 1.97
PDS5AQ29RF7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC27.36■■□□□ 1.97
PDS5AQ29RF7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.36■■□□□ 1.97
PDS5AQ29RF7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
PDS5AQ29RF7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDS5AQ29RF7 LINC00543-201ENST00000567234 1845 ntBASIC27.36■■□□□ 1.97
PDS5AQ29RF7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDS5AQ29RF7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms