Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRP1Q07954 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC13.62□□□□□ -0.23
LRP1Q07954 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LRP1Q07954 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.62□□□□□ -0.23
LRP1Q07954 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.62□□□□□ -0.23
LRP1Q07954 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRP1Q07954 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LRP1Q07954 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRP1Q07954 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRP1Q07954 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC13.61□□□□□ -0.23
LRP1Q07954 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LRP1Q07954 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRP1Q07954 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC13.61□□□□□ -0.23
LRP1Q07954 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRP1Q07954 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRP1Q07954 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.61□□□□□ -0.23
LRP1Q07954 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LRP1Q07954 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.61□□□□□ -0.23
LRP1Q07954 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRP1Q07954 AC104771.1-201ENST00000603335 964 ntBASIC13.61□□□□□ -0.23
LRP1Q07954 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRP1Q07954 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.6□□□□□ -0.23
LRP1Q07954 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.6□□□□□ -0.23
LRP1Q07954 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRP1Q07954 AC012414.1-201ENST00000556676 535 ntBASIC13.6□□□□□ -0.23
LRP1Q07954 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.6□□□□□ -0.23
LRP1Q07954 MIR6084-201ENST00000622012 110 ntBASIC13.6□□□□□ -0.23
LRP1Q07954 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.6□□□□□ -0.23
LRP1Q07954 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
LRP1Q07954 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LRP1Q07954 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRP1Q07954 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
LRP1Q07954 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.6□□□□□ -0.23
LRP1Q07954 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRP1Q07954 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.6□□□□□ -0.23
LRP1Q07954 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.6□□□□□ -0.23
LRP1Q07954 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LRP1Q07954 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRP1Q07954 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC13.59□□□□□ -0.23
LRP1Q07954 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRP1Q07954 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.59□□□□□ -0.23
LRP1Q07954 pRNA.6-201ENST00000610482 90 ntBASIC13.59□□□□□ -0.23
LRP1Q07954 pRNA.5-201ENST00000612139 90 ntBASIC13.59□□□□□ -0.23
LRP1Q07954 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13.59□□□□□ -0.23
LRP1Q07954 pRNA.11-201ENST00000618423 90 ntBASIC13.59□□□□□ -0.23
LRP1Q07954 pRNA.13-201ENST00000619112 90 ntBASIC13.59□□□□□ -0.23
LRP1Q07954 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LRP1Q07954 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
LRP1Q07954 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.59□□□□□ -0.23
LRP1Q07954 AC066615.1-201ENST00000640911 628 ntBASIC13.59□□□□□ -0.23
LRP1Q07954 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LRP1Q07954 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRP1Q07954 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LRP1Q07954 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LRP1Q07954 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LRP1Q07954 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRP1Q07954 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.58□□□□□ -0.23
LRP1Q07954 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
LRP1Q07954 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC13.58□□□□□ -0.24
LRP1Q07954 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRP1Q07954 SLC6A10P-202ENST00000431994 2058 ntBASIC13.58□□□□□ -0.24
LRP1Q07954 SHF-208ENST00000560734 1731 ntTSL 3 BASIC13.58□□□□□ -0.24
LRP1Q07954 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LRP1Q07954 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.58□□□□□ -0.24
LRP1Q07954 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.58□□□□□ -0.24
LRP1Q07954 NTF6G-201ENST00000591094 616 ntBASIC13.58□□□□□ -0.24
LRP1Q07954 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRP1Q07954 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LRP1Q07954 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.58□□□□□ -0.24
LRP1Q07954 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.58□□□□□ -0.24
LRP1Q07954 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRP1Q07954 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LRP1Q07954 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRP1Q07954 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.57□□□□□ -0.24
LRP1Q07954 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.57□□□□□ -0.24
LRP1Q07954 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.57□□□□□ -0.24
LRP1Q07954 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRP1Q07954 VGF-203ENST00000611537 1622 ntTSL 5 BASIC13.57□□□□□ -0.24
LRP1Q07954 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC13.57□□□□□ -0.24
LRP1Q07954 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRP1Q07954 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LRP1Q07954 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC13.57□□□□□ -0.24
LRP1Q07954 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.57□□□□□ -0.24
LRP1Q07954 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRP1Q07954 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRP1Q07954 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRP1Q07954 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRP1Q07954 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.56□□□□□ -0.24
LRP1Q07954 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRP1Q07954 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRP1Q07954 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC13.56□□□□□ -0.24
LRP1Q07954 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.56□□□□□ -0.24
LRP1Q07954 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LRP1Q07954 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRP1Q07954 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.56□□□□□ -0.24
LRP1Q07954 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.56□□□□□ -0.24
LRP1Q07954 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LRP1Q07954 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.56□□□□□ -0.24
LRP1Q07954 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LRP1Q07954 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms