Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 SUI3YPL237W 858 nt5.58□□□□□ -1.52
SSL2Q00578 MNT2YGL257C 1677 nt5.58□□□□□ -1.52
SSL2Q00578 CAF4YKR036C 1932 nt5.58□□□□□ -1.52
SSL2Q00578 TIM54YJL054W 1437 nt5.57□□□□□ -1.52
SSL2Q00578 HAP1YLR256W 4509 nt5.57□□□□□ -1.52
SSL2Q00578 HXT4YHR092C 1731 nt5.57□□□□□ -1.52
SSL2Q00578 ARD1YHR013C 717 nt5.57□□□□□ -1.52
SSL2Q00578 DCG1YIR030C 735 nt5.57□□□□□ -1.52
SSL2Q00578 SFK1YKL051W 1062 nt5.57□□□□□ -1.52
SSL2Q00578 YOR318CYOR318C 306 nt5.57□□□□□ -1.52
SSL2Q00578 VTH1YIL173W 4650 nt5.57□□□□□ -1.52
SSL2Q00578 VTH2YJL222W 4650 nt5.57□□□□□ -1.52
SSL2Q00578 SDA1YGR245C 2304 nt5.57□□□□□ -1.52
SSL2Q00578 THI21YPL258C 1656 nt5.56□□□□□ -1.52
SSL2Q00578 BUD14YAR014C 2130 nt5.56□□□□□ -1.52
SSL2Q00578 ABD1YBR236C 1311 nt5.56□□□□□ -1.52
SSL2Q00578 MCX1YBR227C 1563 nt5.56□□□□□ -1.52
SSL2Q00578 YDR134CYDR134C 411 nt5.56□□□□□ -1.52
SSL2Q00578 BGL2YGR282C 942 nt5.56□□□□□ -1.52
SSL2Q00578 DCD1YHR144C 939 nt5.56□□□□□ -1.52
SSL2Q00578 MAC1YMR021C 1254 nt5.56□□□□□ -1.52
SSL2Q00578 UBA3YPR066W 900 nt5.56□□□□□ -1.52
SSL2Q00578 YPR109WYPR109W 885 nt5.56□□□□□ -1.52
SSL2Q00578 CDC28YBR160W 897 nt5.56□□□□□ -1.52
SSL2Q00578 Q0017Q0017 162 nt5.56□□□□□ -1.52
SSL2Q00578 CYK3YDL117W 2658 nt5.56□□□□□ -1.52
SSL2Q00578 GIP1YBR045C 1920 nt5.56□□□□□ -1.52
SSL2Q00578 VID22YLR373C 2706 nt5.55□□□□□ -1.52
SSL2Q00578 YTA12YMR089C 2478 nt5.55□□□□□ -1.52
SSL2Q00578 FAU1YER183C 636 nt5.55□□□□□ -1.52
SSL2Q00578 SCL1YGL011C 759 nt5.55□□□□□ -1.52
SSL2Q00578 YNG2YHR090C 849 nt5.55□□□□□ -1.52
SSL2Q00578 YJL215CYJL215C 360 nt5.55□□□□□ -1.52
SSL2Q00578 YLR366WYLR366W 306 nt5.55□□□□□ -1.52
SSL2Q00578 YBL029WYBL029W 1131 nt5.55□□□□□ -1.52
SSL2Q00578 YOR200WYOR200W 399 nt5.55□□□□□ -1.52
SSL2Q00578 YHR182WYHR182W 2358 nt5.55□□□□□ -1.52
SSL2Q00578 MTF2YDL044C 1323 nt5.54□□□□□ -1.52
SSL2Q00578 UBX7YBR273C 1311 nt5.54□□□□□ -1.52
SSL2Q00578 RPC53YDL150W 1269 nt5.54□□□□□ -1.52
SSL2Q00578 SYF2YGR129W 648 nt5.54□□□□□ -1.52
SSL2Q00578 YGR168CYGR168C 1131 nt5.54□□□□□ -1.52
SSL2Q00578 NOP13YNL175C 1212 nt5.54□□□□□ -1.52
SSL2Q00578 ZPS1YOL154W 750 nt5.54□□□□□ -1.52
SSL2Q00578 THI80YOR143C 960 nt5.54□□□□□ -1.52
SSL2Q00578 MET16YPR167C 786 nt5.54□□□□□ -1.52
SSL2Q00578 CKS1YBR135W 453 nt5.54□□□□□ -1.52
SSL2Q00578 YMD8YML038C 1329 nt5.53□□□□□ -1.52
SSL2Q00578 IWR1YDL115C 1062 nt5.53□□□□□ -1.52
SSL2Q00578 MNN10YDR245W 1182 nt5.53□□□□□ -1.52
SSL2Q00578 SLO1YER180C-A 258 nt5.53□□□□□ -1.52
SSL2Q00578 MRPL4YLR439W 960 nt5.53□□□□□ -1.52
SSL2Q00578 GTR1YML121W 933 nt5.53□□□□□ -1.52
SSL2Q00578 YNL019CYNL019C 855 nt5.53□□□□□ -1.52
SSL2Q00578 YNL033WYNL033W 855 nt5.53□□□□□ -1.52
SSL2Q00578 YOL166CYOL166C 339 nt5.53□□□□□ -1.52
SSL2Q00578 MMT2YPL224C 1455 nt5.52□□□□□ -1.53
SSL2Q00578 PRP9YDL030W 1593 nt5.52□□□□□ -1.53
SSL2Q00578 SHR3YDL212W 633 nt5.52□□□□□ -1.53
SSL2Q00578 YDR124WYDR124W 975 nt5.52□□□□□ -1.53
SSL2Q00578 SKI6YGR195W 741 nt5.52□□□□□ -1.53
SSL2Q00578 TRX2YGR209C 315 nt5.52□□□□□ -1.53
SSL2Q00578 PPE1YHR075C 1203 nt5.52□□□□□ -1.53
SSL2Q00578 RHO3YIL118W 696 nt5.52□□□□□ -1.53
SSL2Q00578 SUI2YJR007W 915 nt5.52□□□□□ -1.53
SSL2Q00578 FUN19YAL034C 1242 nt5.52□□□□□ -1.53
SSL2Q00578 HYM1YKL189W 1200 nt5.52□□□□□ -1.53
SSL2Q00578 POM33YLL023C 840 nt5.52□□□□□ -1.53
SSL2Q00578 YLR118CYLR118C 684 nt5.52□□□□□ -1.53
SSL2Q00578 EMP46YLR080W 1335 nt5.51□□□□□ -1.53
SSL2Q00578 RMD1YDL001W 1293 nt5.51□□□□□ -1.53
SSL2Q00578 RSM10YDR041W 612 nt5.51□□□□□ -1.53
SSL2Q00578 RPL12AYEL054C 498 nt5.51□□□□□ -1.53
SSL2Q00578 PRO3YER023W 861 nt5.51□□□□□ -1.53
SSL2Q00578 GEP7YGL057C 864 nt5.51□□□□□ -1.53
SSL2Q00578 SPO74YGL170C 1242 nt5.51□□□□□ -1.53
SSL2Q00578 YGR153WYGR153W 654 nt5.51□□□□□ -1.53
SSL2Q00578 SYN8YAL014C 768 nt5.51□□□□□ -1.53
SSL2Q00578 YKL151CYKL151C 1014 nt5.51□□□□□ -1.53
SSL2Q00578 TFA2YKR062W 987 nt5.51□□□□□ -1.53
SSL2Q00578 SEC65YML105C 822 nt5.51□□□□□ -1.53
SSL2Q00578 SPO20YMR017W 1194 nt5.51□□□□□ -1.53
SSL2Q00578 YOL162WYOL162W 648 nt5.51□□□□□ -1.53
SSL2Q00578 RPN8YOR261C 1017 nt5.51□□□□□ -1.53
SSL2Q00578 EFM2YBR271W 1260 nt5.51□□□□□ -1.53
SSL2Q00578 YBR292CYBR292C 372 nt5.51□□□□□ -1.53
SSL2Q00578 GCN20YFR009W 2259 nt5.5□□□□□ -1.53
SSL2Q00578 CBP1YJL209W 1965 nt5.5□□□□□ -1.53
SSL2Q00578 YDR249CYDR249C 1122 nt5.5□□□□□ -1.53
SSL2Q00578 DBP8YHR169W 1296 nt5.5□□□□□ -1.53
SSL2Q00578 AIM23YJL131C 1071 nt5.5□□□□□ -1.53
SSL2Q00578 YKL023WYKL023W 834 nt5.5□□□□□ -1.53
SSL2Q00578 ENV9YOR246C 993 nt5.5□□□□□ -1.53
SSL2Q00578 YOR292CYOR292C 930 nt5.5□□□□□ -1.53
SSL2Q00578 ECM33YBR078W 1290 nt5.5□□□□□ -1.53
SSL2Q00578 SKG3YLR187W 3081 nt5.5□□□□□ -1.53
SSL2Q00578 GAS3YMR215W 1575 nt5.5□□□□□ -1.53
SSL2Q00578 TUP1YCR084C 2142 nt5.5□□□□□ -1.53
SSL2Q00578 RRP14YKL082C 1305 nt5.49□□□□□ -1.53
SSL2Q00578 TFC7YOR110W 1308 nt5.49□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms