Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
UBE2NP61088 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
UBE2NP61088 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2NP61088 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.89■□□□□ 0.77
UBE2NP61088 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2NP61088 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2NP61088 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2NP61088 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.89■□□□□ 0.77
UBE2NP61088 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2NP61088 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2NP61088 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.88■□□□□ 0.77
UBE2NP61088 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2NP61088 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2NP61088 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
UBE2NP61088 AC008406.3-201ENST00000620001 1374 ntBASIC19.88■□□□□ 0.77
UBE2NP61088 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2NP61088 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.88■□□□□ 0.77
UBE2NP61088 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2NP61088 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.88■□□□□ 0.77
UBE2NP61088 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.88■□□□□ 0.77
UBE2NP61088 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.88■□□□□ 0.77
UBE2NP61088 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.88■□□□□ 0.77
UBE2NP61088 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
UBE2NP61088 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.88■□□□□ 0.77
UBE2NP61088 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2NP61088 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.87■□□□□ 0.77
UBE2NP61088 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2NP61088 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2NP61088 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.87■□□□□ 0.77
UBE2NP61088 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UBE2NP61088 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
UBE2NP61088 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.87■□□□□ 0.77
UBE2NP61088 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.87■□□□□ 0.77
UBE2NP61088 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.87■□□□□ 0.77
UBE2NP61088 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.87■□□□□ 0.77
UBE2NP61088 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.87■□□□□ 0.77
UBE2NP61088 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.87■□□□□ 0.77
UBE2NP61088 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2NP61088 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2NP61088 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2NP61088 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.87■□□□□ 0.77
UBE2NP61088 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.87■□□□□ 0.77
UBE2NP61088 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2NP61088 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2NP61088 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2NP61088 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
UBE2NP61088 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.86■□□□□ 0.77
UBE2NP61088 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.86■□□□□ 0.77
UBE2NP61088 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
UBE2NP61088 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2NP61088 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2NP61088 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2NP61088 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.85■□□□□ 0.77
UBE2NP61088 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2NP61088 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
UBE2NP61088 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2NP61088 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UBE2NP61088 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2NP61088 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2NP61088 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
UBE2NP61088 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2NP61088 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2NP61088 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.84■□□□□ 0.77
UBE2NP61088 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2NP61088 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2NP61088 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.84■□□□□ 0.77
UBE2NP61088 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
UBE2NP61088 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2NP61088 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2NP61088 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
UBE2NP61088 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2NP61088 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2NP61088 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
UBE2NP61088 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2NP61088 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2NP61088 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2NP61088 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2NP61088 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.83■□□□□ 0.77
UBE2NP61088 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2NP61088 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2NP61088 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2NP61088 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.83■□□□□ 0.76
UBE2NP61088 AC004812.2-201ENST00000611079 2094 ntBASIC19.82■□□□□ 0.76
UBE2NP61088 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2NP61088 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2NP61088 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2NP61088 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE2NP61088 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE2NP61088 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2NP61088 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2NP61088 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2NP61088 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2NP61088 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2NP61088 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2NP61088 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2NP61088 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
UBE2NP61088 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2NP61088 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2NP61088 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
UBE2NP61088 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms