Protein–RNA interactions for Protein: P42574

CASP3, Caspase-3, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3P42574 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CASP3P42574 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASP3P42574 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASP3P42574 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.11■□□□□ 0.97
CASP3P42574 KRT16P3-201ENST00000439127 1283 ntBASIC21.11■□□□□ 0.97
CASP3P42574 AC004448.1-201ENST00000458332 883 ntBASIC21.11■□□□□ 0.97
CASP3P42574 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CASP3P42574 MTDHP2-201ENST00000601468 714 ntBASIC21.11■□□□□ 0.97
CASP3P42574 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.11■□□□□ 0.97
CASP3P42574 AC010997.5-201ENST00000609182 354 ntBASIC21.11■□□□□ 0.97
CASP3P42574 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASP3P42574 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASP3P42574 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASP3P42574 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CASP3P42574 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CASP3P42574 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CASP3P42574 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CASP3P42574 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.1■□□□□ 0.97
CASP3P42574 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.1■□□□□ 0.97
CASP3P42574 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CASP3P42574 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CASP3P42574 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CASP3P42574 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASP3P42574 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASP3P42574 AL022069.1-201ENST00000568025 1636 ntBASIC21.09■□□□□ 0.97
CASP3P42574 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASP3P42574 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.09■□□□□ 0.97
CASP3P42574 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.09■□□□□ 0.97
CASP3P42574 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASP3P42574 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CASP3P42574 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CASP3P42574 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CASP3P42574 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CASP3P42574 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CASP3P42574 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CASP3P42574 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CASP3P42574 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CASP3P42574 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.08■□□□□ 0.97
CASP3P42574 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.08■□□□□ 0.97
CASP3P42574 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CASP3P42574 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.08■□□□□ 0.97
CASP3P42574 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CASP3P42574 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CASP3P42574 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASP3P42574 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.07■□□□□ 0.96
CASP3P42574 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CASP3P42574 MIR6722-201ENST00000617286 78 ntBASIC21.07■□□□□ 0.96
CASP3P42574 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.07■□□□□ 0.96
CASP3P42574 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.07■□□□□ 0.96
CASP3P42574 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CASP3P42574 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
CASP3P42574 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.07■□□□□ 0.96
CASP3P42574 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP3P42574 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CASP3P42574 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP3P42574 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CASP3P42574 AL024507.2-201ENST00000606070 2574 ntBASIC21.06■□□□□ 0.96
CASP3P42574 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CASP3P42574 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP3P42574 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CASP3P42574 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CASP3P42574 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP3P42574 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP3P42574 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP3P42574 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP3P42574 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP3P42574 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP3P42574 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP3P42574 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP3P42574 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP3P42574 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CASP3P42574 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.05■□□□□ 0.96
CASP3P42574 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP3P42574 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP3P42574 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CASP3P42574 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP3P42574 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP3P42574 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP3P42574 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP3P42574 MIR6724-1-201ENST00000616420 92 ntBASIC21.04■□□□□ 0.96
CASP3P42574 MIR6724-2-201ENST00000616483 92 ntBASIC21.04■□□□□ 0.96
CASP3P42574 MIR6724-4-201ENST00000617390 92 ntBASIC21.04■□□□□ 0.96
CASP3P42574 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.04■□□□□ 0.96
CASP3P42574 MIR6724-3-201ENST00000622482 92 ntBASIC21.04■□□□□ 0.96
CASP3P42574 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CASP3P42574 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.04■□□□□ 0.96
CASP3P42574 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CASP3P42574 AL161729.1-201ENST00000604104 1402 ntBASIC21.04■□□□□ 0.96
CASP3P42574 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP3P42574 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.03■□□□□ 0.96
CASP3P42574 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP3P42574 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP3P42574 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CASP3P42574 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CASP3P42574 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CASP3P42574 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.03■□□□□ 0.96
CASP3P42574 AC131212.1-201ENST00000613771 668 ntBASIC21.03■□□□□ 0.96
CASP3P42574 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP3P42574 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP3P42574 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms