Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 RHO3YIL118W 696 nt5.47□□□□□ -1.53
RTR1P40084 GDH2YDL215C 3279 nt5.47□□□□□ -1.53
RTR1P40084 STB3YDR169C 1542 nt5.47□□□□□ -1.53
RTR1P40084 GCR1YPL075W 2358 nt5.47□□□□□ -1.53
RTR1P40084 RXT3YDL076C 885 nt5.46□□□□□ -1.54
RTR1P40084 KRE28YDR532C 1158 nt5.46□□□□□ -1.54
RTR1P40084 CNB1YKL190W 528 nt5.46□□□□□ -1.54
RTR1P40084 PDX3YBR035C 687 nt5.46□□□□□ -1.54
RTR1P40084 KDX1YKL161C 1302 nt5.46□□□□□ -1.54
RTR1P40084 PEX29YDR479C 1665 nt5.45□□□□□ -1.54
RTR1P40084 NUP42YDR192C 1293 nt5.45□□□□□ -1.54
RTR1P40084 YLR157W-DYLR157W-D 213 nt5.45□□□□□ -1.54
RTR1P40084 RAD52YML032C 1416 nt5.45□□□□□ -1.54
RTR1P40084 HXT7YDR342C 1713 nt5.45□□□□□ -1.54
RTR1P40084 HXT6YDR343C 1713 nt5.45□□□□□ -1.54
RTR1P40084 MET4YNL103W 2019 nt5.45□□□□□ -1.54
RTR1P40084 SPC97YHR172W 2472 nt5.45□□□□□ -1.54
RTR1P40084 TDA7YNL176C 1911 nt5.44□□□□□ -1.54
RTR1P40084 HIS4YCL030C 2400 nt5.44□□□□□ -1.54
RTR1P40084 ENV9YOR246C 993 nt5.44□□□□□ -1.54
RTR1P40084 SUE1YPR151C 621 nt5.44□□□□□ -1.54
RTR1P40084 DIT2YDR402C 1470 nt5.44□□□□□ -1.54
RTR1P40084 ECM7YLR443W 1347 nt5.44□□□□□ -1.54
RTR1P40084 MSS116YDR194C 1995 nt5.44□□□□□ -1.54
RTR1P40084 THS1YIL078W 2205 nt5.43□□□□□ -1.54
RTR1P40084 ORM1YGR038W 669 nt5.43□□□□□ -1.54
RTR1P40084 TEF4YKL081W 1239 nt5.43□□□□□ -1.54
RTR1P40084 YLR407WYLR407W 687 nt5.43□□□□□ -1.54
RTR1P40084 YBL010CYBL010C 843 nt5.43□□□□□ -1.54
RTR1P40084 SUL2YLR092W 2682 nt5.43□□□□□ -1.54
RTR1P40084 NOP7YGR103W 1818 nt5.43□□□□□ -1.54
RTR1P40084 WTM1YOR230W 1314 nt5.43□□□□□ -1.54
RTR1P40084 RAD57YDR004W 1383 nt5.42□□□□□ -1.54
RTR1P40084 BUD13YGL174W 801 nt5.42□□□□□ -1.54
RTR1P40084 COG1YGL223C 1254 nt5.42□□□□□ -1.54
RTR1P40084 CTT1YGR088W 1689 nt5.42□□□□□ -1.54
RTR1P40084 PRD1YCL057W 2139 nt5.42□□□□□ -1.54
RTR1P40084 FRT2YAL028W 1587 nt5.42□□□□□ -1.54
RTR1P40084 PRP31YGR091W 1485 nt5.41□□□□□ -1.54
RTR1P40084 YDR056CYDR056C 618 nt5.41□□□□□ -1.54
RTR1P40084 ENT5YDR153C 1236 nt5.41□□□□□ -1.54
RTR1P40084 YIL021C-AYIL021C-A 270 nt5.41□□□□□ -1.54
RTR1P40084 YJU2YKL095W 837 nt5.41□□□□□ -1.54
RTR1P40084 CDC42YLR229C 576 nt5.41□□□□□ -1.54
RTR1P40084 SUA7YPR086W 1038 nt5.41□□□□□ -1.54
RTR1P40084 TUL1YKL034W 2277 nt5.39□□□□□ -1.55
RTR1P40084 API2YDR525W 330 nt5.39□□□□□ -1.55
RTR1P40084 YFR052C-AYFR052C-A 306 nt5.39□□□□□ -1.55
RTR1P40084 YKL107WYKL107W 930 nt5.39□□□□□ -1.55
RTR1P40084 YML031C-AYML031C-A 336 nt5.39□□□□□ -1.55
RTR1P40084 YNL194CYNL194C 906 nt5.39□□□□□ -1.55
RTR1P40084 PDR16YNL231C 1056 nt5.39□□□□□ -1.55
RTR1P40084 APC1YNL172W 5247 nt5.39□□□□□ -1.55
RTR1P40084 CLF1YLR117C 2064 nt5.38□□□□□ -1.55
RTR1P40084 BNA6YFR047C 888 nt5.38□□□□□ -1.55
RTR1P40084 PDE1YGL248W 1110 nt5.38□□□□□ -1.55
RTR1P40084 YMD8YML038C 1329 nt5.38□□□□□ -1.55
RTR1P40084 ADY3YDL239C 2373 nt5.37□□□□□ -1.55
RTR1P40084 tQ(UUG)CtQ(UUG)C 72 nt5.37□□□□□ -1.55
RTR1P40084 tQ(UUG)D1tQ(UUG)D1 72 nt5.37□□□□□ -1.55
RTR1P40084 tQ(UUG)D2tQ(UUG)D2 72 nt5.37□□□□□ -1.55
RTR1P40084 tQ(UUG)D3tQ(UUG)D3 72 nt5.37□□□□□ -1.55
RTR1P40084 tQ(UUG)E1tQ(UUG)E1 72 nt5.37□□□□□ -1.55
RTR1P40084 tQ(UUG)HtQ(UUG)H 72 nt5.37□□□□□ -1.55
RTR1P40084 tQ(UUG)LtQ(UUG)L 72 nt5.37□□□□□ -1.55
RTR1P40084 YMR135W-AYMR135W-A 534 nt5.37□□□□□ -1.55
RTR1P40084 GWT1YJL091C 1473 nt5.37□□□□□ -1.55
RTR1P40084 ADP1YCR011C 3150 nt5.37□□□□□ -1.55
RTR1P40084 YCR006CYCR006C 474 nt5.36□□□□□ -1.55
RTR1P40084 RPC53YDL150W 1269 nt5.36□□□□□ -1.55
RTR1P40084 AIM7YDR063W 450 nt5.36□□□□□ -1.55
RTR1P40084 YHR212W-AYHR212W-A 204 nt5.36□□□□□ -1.55
RTR1P40084 RAD27YKL113C 1149 nt5.36□□□□□ -1.55
RTR1P40084 YAR061WYAR061W 204 nt5.36□□□□□ -1.55
RTR1P40084 CSR1YLR380W 1227 nt5.36□□□□□ -1.55
RTR1P40084 VPS68YOL129W 555 nt5.36□□□□□ -1.55
RTR1P40084 PAP1YKR002W 1707 nt5.36□□□□□ -1.55
RTR1P40084 TRM11YOL124C 1302 nt5.35□□□□□ -1.55
RTR1P40084 EFB1YAL003W 621 nt5.35□□□□□ -1.55
RTR1P40084 FHL1YPR104C 2811 nt5.35□□□□□ -1.55
RTR1P40084 PMT2YAL023C 2280 nt5.34□□□□□ -1.55
RTR1P40084 BUD25YER014C-A 462 nt5.34□□□□□ -1.55
RTR1P40084 YIL171WYIL171W 330 nt5.34□□□□□ -1.55
RTR1P40084 RDN5-1RDN5-1 121 nt5.34□□□□□ -1.55
RTR1P40084 RDN5-6RDN5-6 121 nt5.34□□□□□ -1.55
RTR1P40084 SPN1YPR133C 1233 nt5.34□□□□□ -1.55
RTR1P40084 BRE4YDL231C 3378 nt5.34□□□□□ -1.55
RTR1P40084 KAP114YGL241W 3015 nt5.34□□□□□ -1.56
RTR1P40084 YCR023CYCR023C 1836 nt5.33□□□□□ -1.56
RTR1P40084 YAR030CYAR030C 342 nt5.33□□□□□ -1.56
RTR1P40084 AST1YBL069W 1290 nt5.33□□□□□ -1.56
RTR1P40084 YOR131CYOR131C 657 nt5.33□□□□□ -1.56
RTR1P40084 EGT2YNL327W 3126 nt5.33□□□□□ -1.56
RTR1P40084 KIN2YLR096W 3444 nt5.33□□□□□ -1.56
RTR1P40084 RPG1YBR079C 2895 nt5.33□□□□□ -1.56
RTR1P40084 YJL215CYJL215C 360 nt5.32□□□□□ -1.56
RTR1P40084 YNL181WYNL181W 1224 nt5.32□□□□□ -1.56
RTR1P40084 GDT1YBR187W 843 nt5.32□□□□□ -1.56
RTR1P40084 LAS1YKR063C 1509 nt5.32□□□□□ -1.56
RTR1P40084 MSK1YNL073W 1731 nt5.31□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms