Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RFC2P35250 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.84■■□□□ 1.57
RFC2P35250 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.84■■□□□ 1.57
RFC2P35250 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
RFC2P35250 DUX4L2-201ENST00000561772 1275 ntBASIC24.84■■□□□ 1.57
RFC2P35250 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.84■■□□□ 1.57
RFC2P35250 DUX4L6-201ENST00000626483 1275 ntBASIC24.84■■□□□ 1.57
RFC2P35250 DUX4L1-201ENST00000627662 1275 ntBASIC24.84■■□□□ 1.57
RFC2P35250 DUX4L8-201ENST00000629013 1275 ntBASIC24.84■■□□□ 1.57
RFC2P35250 DUX4L3-201ENST00000630187 1275 ntBASIC24.84■■□□□ 1.57
RFC2P35250 DUX4L7-201ENST00000630678 1275 ntBASIC24.84■■□□□ 1.57
RFC2P35250 DUX4L5-201ENST00000630834 1275 ntBASIC24.84■■□□□ 1.57
RFC2P35250 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFC2P35250 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
RFC2P35250 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
RFC2P35250 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RFC2P35250 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
RFC2P35250 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.83■■□□□ 1.57
RFC2P35250 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.83■■□□□ 1.57
RFC2P35250 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RFC2P35250 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
RFC2P35250 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.83■■□□□ 1.57
RFC2P35250 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
RFC2P35250 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
RFC2P35250 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RFC2P35250 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
RFC2P35250 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.82■■□□□ 1.56
RFC2P35250 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RFC2P35250 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RFC2P35250 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
RFC2P35250 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RFC2P35250 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.81■■□□□ 1.56
RFC2P35250 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.81■■□□□ 1.56
RFC2P35250 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
RFC2P35250 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
RFC2P35250 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.81■■□□□ 1.56
RFC2P35250 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.81■■□□□ 1.56
RFC2P35250 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RFC2P35250 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.81■■□□□ 1.56
RFC2P35250 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
RFC2P35250 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.81■■□□□ 1.56
RFC2P35250 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RFC2P35250 AC141586.4-201ENST00000624558 1573 ntBASIC24.8■■□□□ 1.56
RFC2P35250 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RFC2P35250 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RFC2P35250 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.8■■□□□ 1.56
RFC2P35250 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RFC2P35250 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RFC2P35250 IGHV3-19-201ENST00000521488 291 ntBASIC24.8■■□□□ 1.56
RFC2P35250 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.8■■□□□ 1.56
RFC2P35250 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.8■■□□□ 1.56
RFC2P35250 AC092437.1-201ENST00000624794 1048 ntBASIC24.8■■□□□ 1.56
RFC2P35250 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RFC2P35250 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RFC2P35250 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RFC2P35250 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RFC2P35250 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RFC2P35250 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.79■■□□□ 1.56
RFC2P35250 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.79■■□□□ 1.56
RFC2P35250 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.79■■□□□ 1.56
RFC2P35250 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RFC2P35250 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RFC2P35250 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.79■■□□□ 1.56
RFC2P35250 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
RFC2P35250 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
RFC2P35250 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.79■■□□□ 1.56
RFC2P35250 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.79■■□□□ 1.56
RFC2P35250 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RFC2P35250 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RFC2P35250 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RFC2P35250 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.79■■□□□ 1.56
RFC2P35250 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
RFC2P35250 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
RFC2P35250 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
RFC2P35250 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
RFC2P35250 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RFC2P35250 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
RFC2P35250 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RFC2P35250 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RFC2P35250 MIR572-201ENST00000384983 95 ntBASIC24.78■■□□□ 1.56
RFC2P35250 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RFC2P35250 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.78■■□□□ 1.56
RFC2P35250 AL354811.1-201ENST00000610286 706 ntBASIC24.78■■□□□ 1.56
RFC2P35250 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
RFC2P35250 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.77■■□□□ 1.56
RFC2P35250 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RFC2P35250 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RFC2P35250 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.77■■□□□ 1.56
RFC2P35250 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RFC2P35250 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
RFC2P35250 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.77■■□□□ 1.56
RFC2P35250 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.77■■□□□ 1.56
RFC2P35250 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.77■■□□□ 1.56
RFC2P35250 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.77■■□□□ 1.56
RFC2P35250 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.77■■□□□ 1.56
RFC2P35250 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RFC2P35250 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.77■■□□□ 1.56
RFC2P35250 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.77■■□□□ 1.56
RFC2P35250 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.77■■□□□ 1.56
RFC2P35250 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms