Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
CPS1P31327 REST-206ENST00000612429 1376 ntTSL 5 BASIC32.62■■■□□ 2.81
CPS1P31327 REST-207ENST00000616975 1370 ntTSL 5 BASIC32.62■■■□□ 2.81
CPS1P31327 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
CPS1P31327 AC006015.1-201ENST00000429970 570 ntBASIC32.61■■■□□ 2.81
CPS1P31327 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CPS1P31327 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC32.61■■■□□ 2.81
CPS1P31327 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CPS1P31327 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CPS1P31327 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC32.61■■■□□ 2.81
CPS1P31327 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC32.61■■■□□ 2.81
CPS1P31327 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC32.61■■■□□ 2.81
CPS1P31327 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
CPS1P31327 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CPS1P31327 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
CPS1P31327 MIR3181-201ENST00000578512 73 ntBASIC32.6■■■□□ 2.81
CPS1P31327 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC32.6■■■□□ 2.81
CPS1P31327 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
CPS1P31327 MIR572-201ENST00000384983 95 ntBASIC32.59■■■□□ 2.81
CPS1P31327 CDCA4P2-201ENST00000441182 718 ntBASIC32.59■■■□□ 2.81
CPS1P31327 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC32.59■■■□□ 2.81
CPS1P31327 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC32.59■■■□□ 2.81
CPS1P31327 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC32.59■■■□□ 2.81
CPS1P31327 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC32.58■■■□□ 2.81
CPS1P31327 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CPS1P31327 AL355802.2-201ENST00000402069 882 ntBASIC32.58■■■□□ 2.81
CPS1P31327 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC32.58■■■□□ 2.81
CPS1P31327 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CPS1P31327 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CPS1P31327 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
CPS1P31327 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CPS1P31327 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC32.57■■■□□ 2.8
CPS1P31327 IGHV3-19-201ENST00000521488 291 ntBASIC32.57■■■□□ 2.8
CPS1P31327 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC32.57■■■□□ 2.8
CPS1P31327 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CPS1P31327 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC32.57■■■□□ 2.8
CPS1P31327 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CPS1P31327 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CPS1P31327 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CPS1P31327 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CPS1P31327 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
CPS1P31327 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
CPS1P31327 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC32.56■■■□□ 2.8
CPS1P31327 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC32.56■■■□□ 2.8
CPS1P31327 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CPS1P31327 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC32.56■■■□□ 2.8
CPS1P31327 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC32.56■■■□□ 2.8
CPS1P31327 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CPS1P31327 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC32.56■■■□□ 2.8
CPS1P31327 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC32.56■■■□□ 2.8
CPS1P31327 MIR6089-201ENST00000616698 64 ntBASIC32.56■■■□□ 2.8
CPS1P31327 AC009086.3-201ENST00000623486 1008 ntBASIC32.56■■■□□ 2.8
CPS1P31327 PKM-203ENST00000389093 2279 ntTSL 5 BASIC32.56■■■□□ 2.8
CPS1P31327 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC32.55■■■□□ 2.8
CPS1P31327 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
CPS1P31327 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CPS1P31327 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC32.54■■■□□ 2.8
CPS1P31327 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CPS1P31327 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
CPS1P31327 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CPS1P31327 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
CPS1P31327 PPP1R14BP3-201ENST00000509033 445 ntBASIC32.52■■■□□ 2.8
CPS1P31327 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
CPS1P31327 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CPS1P31327 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
CPS1P31327 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC32.51■■■□□ 2.8
CPS1P31327 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC32.51■■■□□ 2.8
CPS1P31327 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC32.51■■■□□ 2.8
CPS1P31327 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC32.51■■■□□ 2.8
CPS1P31327 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.8
CPS1P31327 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC32.51■■■□□ 2.79
CPS1P31327 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CPS1P31327 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CPS1P31327 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC32.5■■■□□ 2.79
CPS1P31327 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC32.5■■■□□ 2.79
CPS1P31327 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC32.5■■■□□ 2.79
CPS1P31327 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC32.5■■■□□ 2.79
CPS1P31327 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CPS1P31327 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
CPS1P31327 GAS2L1P2-201ENST00000436355 1356 ntBASIC32.49■■■□□ 2.79
CPS1P31327 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC32.49■■■□□ 2.79
CPS1P31327 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CPS1P31327 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
CPS1P31327 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CPS1P31327 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
CPS1P31327 AC026185.1-201ENST00000445748 174 ntBASIC32.48■■■□□ 2.79
CPS1P31327 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC32.48■■■□□ 2.79
CPS1P31327 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
CPS1P31327 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CPS1P31327 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CPS1P31327 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC32.48■■■□□ 2.79
CPS1P31327 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CPS1P31327 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC32.48■■■□□ 2.79
CPS1P31327 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC32.47■■■□□ 2.79
CPS1P31327 LINC02228-203ENST00000641970 1355 ntBASIC32.47■■■□□ 2.79
CPS1P31327 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CPS1P31327 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CPS1P31327 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CPS1P31327 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC32.46■■■□□ 2.79
CPS1P31327 MAP2K4P1-201ENST00000438453 1195 ntBASIC32.46■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms