Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 SAS10YDL153C 1833 nt5.41□□□□□ -1.54
MSH1P25846 NOT3YIL038C 2511 nt5.41□□□□□ -1.54
MSH1P25846 GDB1YPR184W 4611 nt5.41□□□□□ -1.54
MSH1P25846 COX26YDR119W-A 201 nt5.41□□□□□ -1.54
MSH1P25846 SAY1YGR263C 1275 nt5.41□□□□□ -1.54
MSH1P25846 HSX1tR(CCU)J 72 nt5.41□□□□□ -1.54
MSH1P25846 YIL152WYIL152W 708 nt5.41□□□□□ -1.54
MSH1P25846 DAL3YIR032C 588 nt5.41□□□□□ -1.54
MSH1P25846 CBF1YJR060W 1056 nt5.41□□□□□ -1.54
MSH1P25846 HLJ1YMR161W 675 nt5.41□□□□□ -1.54
MSH1P25846 ROT1YMR200W 771 nt5.41□□□□□ -1.54
MSH1P25846 ELA1YNL230C 1140 nt5.41□□□□□ -1.54
MSH1P25846 SRB6YBR253W 366 nt5.41□□□□□ -1.54
MSH1P25846 EMP46YLR080W 1335 nt5.41□□□□□ -1.54
MSH1P25846 UBX7YBR273C 1311 nt5.41□□□□□ -1.54
MSH1P25846 RIM15YFL033C 5313 nt5.41□□□□□ -1.54
MSH1P25846 TGL1YKL140W 1647 nt5.41□□□□□ -1.54
MSH1P25846 NTH2YBR001C 2343 nt5.4□□□□□ -1.54
MSH1P25846 TRS23YDR246W 660 nt5.4□□□□□ -1.54
MSH1P25846 GRX4YER174C 735 nt5.4□□□□□ -1.54
MSH1P25846 SCL1YGL011C 759 nt5.4□□□□□ -1.54
MSH1P25846 YOR008W-BYOR008W-B 102 nt5.4□□□□□ -1.54
MSH1P25846 AFT1YGL071W 2073 nt5.39□□□□□ -1.55
MSH1P25846 IMA1YGR287C 1770 nt5.39□□□□□ -1.55
MSH1P25846 MPH2YDL247W 1830 nt5.39□□□□□ -1.55
MSH1P25846 PRM2YIL037C 1971 nt5.39□□□□□ -1.55
MSH1P25846 ARP2YDL029W 1176 nt5.39□□□□□ -1.55
MSH1P25846 YDR282CYDR282C 1245 nt5.39□□□□□ -1.55
MSH1P25846 SPL2YHR136C 447 nt5.39□□□□□ -1.55
MSH1P25846 SYN8YAL014C 768 nt5.39□□□□□ -1.55
MSH1P25846 YLL059CYLL059C 507 nt5.39□□□□□ -1.55
MSH1P25846 NMD4YLR363C 657 nt5.39□□□□□ -1.55
MSH1P25846 YLR374CYLR374C 390 nt5.39□□□□□ -1.55
MSH1P25846 YMR245WYMR245W 621 nt5.39□□□□□ -1.55
MSH1P25846 PFA4YOL003C 1137 nt5.39□□□□□ -1.55
MSH1P25846 ARG1YOL058W 1263 nt5.39□□□□□ -1.55
MSH1P25846 YNG1YOR064C 660 nt5.39□□□□□ -1.55
MSH1P25846 DCC1YCL016C 1143 nt5.39□□□□□ -1.55
MSH1P25846 YCL021W-AYCL021W-A 378 nt5.39□□□□□ -1.55
MSH1P25846 ZUO1YGR285C 1302 nt5.39□□□□□ -1.55
MSH1P25846 BDP1YNL039W 1785 nt5.39□□□□□ -1.55
MSH1P25846 SIF2YBR103W 1608 nt5.38□□□□□ -1.55
MSH1P25846 NIT2YJL126W 924 nt5.38□□□□□ -1.55
MSH1P25846 YMR075C-AYMR075C-A 366 nt5.38□□□□□ -1.55
MSH1P25846 TIF34YMR146C 1044 nt5.38□□□□□ -1.55
MSH1P25846 COG5YNL051W 1212 nt5.38□□□□□ -1.55
MSH1P25846 NAT3YPR131C 588 nt5.38□□□□□ -1.55
MSH1P25846 CUS1YMR240C 1311 nt5.38□□□□□ -1.55
MSH1P25846 YDL109CYDL109C 1944 nt5.38□□□□□ -1.55
MSH1P25846 RTT106YNL206C 1368 nt5.38□□□□□ -1.55
MSH1P25846 SIR1YKR101W 1965 nt5.38□□□□□ -1.55
MSH1P25846 TMN2YDR107C 2019 nt5.38□□□□□ -1.55
MSH1P25846 CNA1YLR433C 1662 nt5.37□□□□□ -1.55
MSH1P25846 SKG3YLR187W 3081 nt5.37□□□□□ -1.55
MSH1P25846 DIN7YDR263C 1293 nt5.37□□□□□ -1.55
MSH1P25846 RPT6YGL048C 1218 nt5.37□□□□□ -1.55
MSH1P25846 LSM12YHR121W 564 nt5.37□□□□□ -1.55
MSH1P25846 MIM2YLR099W-A 264 nt5.37□□□□□ -1.55
MSH1P25846 YBL077WYBL077W 432 nt5.37□□□□□ -1.55
MSH1P25846 ETT1YOR051C 1239 nt5.37□□□□□ -1.55
MSH1P25846 YBR196C-BYBR196C-B 105 nt5.37□□□□□ -1.55
MSH1P25846 FPK1YNR047W 2682 nt5.37□□□□□ -1.55
MSH1P25846 FUI1YBL042C 1920 nt5.36□□□□□ -1.55
MSH1P25846 SNF3YDL194W 2655 nt5.36□□□□□ -1.55
MSH1P25846 SCM3YDL139C 672 nt5.36□□□□□ -1.55
MSH1P25846 YDR417CYDR417C 372 nt5.36□□□□□ -1.55
MSH1P25846 HSP31YDR533C 714 nt5.36□□□□□ -1.55
MSH1P25846 YML057C-AYML057C-A 390 nt5.36□□□□□ -1.55
MSH1P25846 YBR126W-AYBR126W-A 207 nt5.36□□□□□ -1.55
MSH1P25846 ASA1YPR085C 1332 nt5.36□□□□□ -1.55
MSH1P25846 LDB17YDL146W 1476 nt5.36□□□□□ -1.55
MSH1P25846 TCM62YBR044C 1719 nt5.36□□□□□ -1.55
MSH1P25846 SEO1YAL067C 1782 nt5.36□□□□□ -1.55
MSH1P25846 GLT1YDL171C 6438 nt5.36□□□□□ -1.55
MSH1P25846 AIM10YER087W 1731 nt5.35□□□□□ -1.55
MSH1P25846 RNY1YPL123C 1305 nt5.35□□□□□ -1.55
MSH1P25846 PHO92YDR374C 921 nt5.35□□□□□ -1.55
MSH1P25846 YER085CYER085C 522 nt5.35□□□□□ -1.55
MSH1P25846 MLC1YGL106W 450 nt5.35□□□□□ -1.55
MSH1P25846 YJR085CYJR085C 318 nt5.35□□□□□ -1.55
MSH1P25846 YLR118CYLR118C 684 nt5.35□□□□□ -1.55
MSH1P25846 BLS1YLR408C 369 nt5.35□□□□□ -1.55
MSH1P25846 SCW10YMR305C 1170 nt5.35□□□□□ -1.55
MSH1P25846 TLG2YOL018C 1194 nt5.35□□□□□ -1.55
MSH1P25846 YBR230W-AYBR230W-A 201 nt5.35□□□□□ -1.55
MSH1P25846 PMT5YDL093W 2232 nt5.35□□□□□ -1.55
MSH1P25846 STE20YHL007C 2820 nt5.34□□□□□ -1.55
MSH1P25846 MCM4YPR019W 2802 nt5.34□□□□□ -1.55
MSH1P25846 YOR1YGR281W 4434 nt5.34□□□□□ -1.55
MSH1P25846 CAB1YDR531W 1104 nt5.34□□□□□ -1.55
MSH1P25846 YEL067CYEL067C 588 nt5.34□□□□□ -1.55
MSH1P25846 NAG1YGR031C-A 492 nt5.34□□□□□ -1.55
MSH1P25846 COS9YKL219W 1224 nt5.34□□□□□ -1.55
MSH1P25846 EMG1YLR186W 759 nt5.34□□□□□ -1.55
MSH1P25846 CBC2YPL178W 627 nt5.34□□□□□ -1.55
MSH1P25846 YDR444WYDR444W 2064 nt5.34□□□□□ -1.55
MSH1P25846 ADE4YMR300C 1533 nt5.33□□□□□ -1.56
MSH1P25846 PRR2YDL214C 2100 nt5.33□□□□□ -1.56
MSH1P25846 TIM54YJL054W 1437 nt5.33□□□□□ -1.56
MSH1P25846 APL6YGR261C 2430 nt5.33□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms