Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 LINC00526-201ENST00000581067 1875 ntBASIC20.88■□□□□ 0.93
NR4A1P22736 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.88■□□□□ 0.93
NR4A1P22736 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NR4A1P22736 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR4A1P22736 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR4A1P22736 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NR4A1P22736 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NR4A1P22736 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.87■□□□□ 0.93
NR4A1P22736 SPCS2P3-201ENST00000500401 656 ntBASIC20.87■□□□□ 0.93
NR4A1P22736 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR4A1P22736 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.87■□□□□ 0.93
NR4A1P22736 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR4A1P22736 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR4A1P22736 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NR4A1P22736 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NR4A1P22736 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR4A1P22736 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR4A1P22736 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR4A1P22736 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
NR4A1P22736 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NR4A1P22736 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NR4A1P22736 AC018755.3-202ENST00000596210 929 ntBASIC20.86■□□□□ 0.93
NR4A1P22736 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NR4A1P22736 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NR4A1P22736 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.86■□□□□ 0.93
NR4A1P22736 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NR4A1P22736 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NR4A1P22736 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NR4A1P22736 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR4A1P22736 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.85■□□□□ 0.93
NR4A1P22736 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NR4A1P22736 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NR4A1P22736 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR4A1P22736 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR4A1P22736 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.85■□□□□ 0.93
NR4A1P22736 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NR4A1P22736 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.85■□□□□ 0.93
NR4A1P22736 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NR4A1P22736 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NR4A1P22736 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NR4A1P22736 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NR4A1P22736 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.84■□□□□ 0.93
NR4A1P22736 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NR4A1P22736 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.84■□□□□ 0.93
NR4A1P22736 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NR4A1P22736 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.84■□□□□ 0.93
NR4A1P22736 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NR4A1P22736 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NR4A1P22736 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.84■□□□□ 0.93
NR4A1P22736 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NR4A1P22736 DUX4L18-201ENST00000553347 1267 ntBASIC20.84■□□□□ 0.93
NR4A1P22736 MIR6765-201ENST00000614092 87 ntBASIC20.84■□□□□ 0.93
NR4A1P22736 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.84■□□□□ 0.93
NR4A1P22736 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NR4A1P22736 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.84■□□□□ 0.93
NR4A1P22736 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
NR4A1P22736 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NR4A1P22736 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NR4A1P22736 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NR4A1P22736 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NR4A1P22736 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR4A1P22736 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR4A1P22736 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR4A1P22736 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR4A1P22736 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NR4A1P22736 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.93
NR4A1P22736 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NR4A1P22736 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.83■□□□□ 0.93
NR4A1P22736 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.83■□□□□ 0.93
NR4A1P22736 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
NR4A1P22736 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR4A1P22736 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NR4A1P22736 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR4A1P22736 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.82■□□□□ 0.92
NR4A1P22736 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR4A1P22736 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NR4A1P22736 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.82■□□□□ 0.92
NR4A1P22736 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.82■□□□□ 0.92
NR4A1P22736 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.82■□□□□ 0.92
NR4A1P22736 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NR4A1P22736 GUSBP5-202ENST00000510805 1989 ntBASIC20.82■□□□□ 0.92
NR4A1P22736 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NR4A1P22736 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.82■□□□□ 0.92
NR4A1P22736 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR4A1P22736 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NR4A1P22736 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.81■□□□□ 0.92
NR4A1P22736 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR4A1P22736 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR4A1P22736 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR4A1P22736 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.81■□□□□ 0.92
NR4A1P22736 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR4A1P22736 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
NR4A1P22736 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR4A1P22736 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR4A1P22736 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR4A1P22736 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR4A1P22736 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR4A1P22736 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
NR4A1P22736 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR4A1P22736 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms