Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 AC009102.2-201ENST00000606772 1639 ntBASIC22.34■■□□□ 1.17
SDHBP21912 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SDHBP21912 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SDHBP21912 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SDHBP21912 AC006015.1-201ENST00000429970 570 ntBASIC22.33■■□□□ 1.17
SDHBP21912 CDCA4P2-201ENST00000441182 718 ntBASIC22.33■■□□□ 1.17
SDHBP21912 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.33■■□□□ 1.17
SDHBP21912 AC073111.5-205ENST00000641717 521 ntBASIC22.33■■□□□ 1.17
SDHBP21912 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SDHBP21912 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
SDHBP21912 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
SDHBP21912 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.16
SDHBP21912 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SDHBP21912 C17orf82-201ENST00000623772 1530 ntBASIC22.32■■□□□ 1.16
SDHBP21912 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SDHBP21912 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SDHBP21912 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SDHBP21912 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SDHBP21912 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.32■■□□□ 1.16
SDHBP21912 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
SDHBP21912 AC006970.2-201ENST00000450065 779 ntBASIC22.32■■□□□ 1.16
SDHBP21912 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.32■■□□□ 1.16
SDHBP21912 AC009086.3-201ENST00000623486 1008 ntBASIC22.32■■□□□ 1.16
SDHBP21912 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SDHBP21912 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SDHBP21912 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SDHBP21912 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SDHBP21912 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
SDHBP21912 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.31■■□□□ 1.16
SDHBP21912 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.31■■□□□ 1.16
SDHBP21912 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.31■■□□□ 1.16
SDHBP21912 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.31■■□□□ 1.16
SDHBP21912 IGHV3-19-201ENST00000521488 291 ntBASIC22.31■■□□□ 1.16
SDHBP21912 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SDHBP21912 MIR6084-201ENST00000622012 110 ntBASIC22.31■■□□□ 1.16
SDHBP21912 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SDHBP21912 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SDHBP21912 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SDHBP21912 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SDHBP21912 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SDHBP21912 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SDHBP21912 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.3■■□□□ 1.16
SDHBP21912 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SDHBP21912 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.3■■□□□ 1.16
SDHBP21912 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SDHBP21912 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.3■■□□□ 1.16
SDHBP21912 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SDHBP21912 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SDHBP21912 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.3■■□□□ 1.16
SDHBP21912 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
SDHBP21912 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SDHBP21912 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.3■■□□□ 1.16
SDHBP21912 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SDHBP21912 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SDHBP21912 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SDHBP21912 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SDHBP21912 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SDHBP21912 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.29■■□□□ 1.16
SDHBP21912 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SDHBP21912 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
SDHBP21912 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SDHBP21912 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.28■■□□□ 1.16
SDHBP21912 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.28■■□□□ 1.16
SDHBP21912 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SDHBP21912 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SDHBP21912 AL499627.2-201ENST00000606283 725 ntBASIC22.28■■□□□ 1.16
SDHBP21912 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SDHBP21912 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SDHBP21912 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SDHBP21912 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SDHBP21912 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SDHBP21912 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.27■■□□□ 1.16
SDHBP21912 AC137761.2-201ENST00000561729 223 ntBASIC22.27■■□□□ 1.16
SDHBP21912 AC145350.3-201ENST00000569033 163 ntBASIC22.27■■□□□ 1.16
SDHBP21912 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SDHBP21912 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.27■■□□□ 1.16
SDHBP21912 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SDHBP21912 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SDHBP21912 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.26■■□□□ 1.15
SDHBP21912 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.26■■□□□ 1.15
SDHBP21912 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.26■■□□□ 1.15
SDHBP21912 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.26■■□□□ 1.15
SDHBP21912 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SDHBP21912 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.26■■□□□ 1.15
SDHBP21912 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.26■■□□□ 1.15
SDHBP21912 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.26■■□□□ 1.15
SDHBP21912 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.26■■□□□ 1.15
SDHBP21912 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SDHBP21912 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.26■■□□□ 1.15
SDHBP21912 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
SDHBP21912 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SDHBP21912 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SDHBP21912 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.26■■□□□ 1.15
SDHBP21912 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SDHBP21912 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.25■■□□□ 1.15
SDHBP21912 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.25■■□□□ 1.15
SDHBP21912 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.25■■□□□ 1.15
SDHBP21912 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
SDHBP21912 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.25■■□□□ 1.15
SDHBP21912 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms