Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
TNFRSF1BP20333 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF1BP20333 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TNFRSF1BP20333 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF1BP20333 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF1BP20333 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TNFRSF1BP20333 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TNFRSF1BP20333 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TNFRSF1BP20333 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.05■□□□□ 0.96
TNFRSF1BP20333 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF1BP20333 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF1BP20333 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF1BP20333 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TNFRSF1BP20333 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF1BP20333 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.04■□□□□ 0.96
TNFRSF1BP20333 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFRSF1BP20333 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFRSF1BP20333 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNFRSF1BP20333 DUX4L18-201ENST00000553347 1267 ntBASIC21.03■□□□□ 0.96
TNFRSF1BP20333 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFRSF1BP20333 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNFRSF1BP20333 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF1BP20333 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF1BP20333 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF1BP20333 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF1BP20333 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF1BP20333 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.02■□□□□ 0.96
TNFRSF1BP20333 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.02■□□□□ 0.96
TNFRSF1BP20333 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
TNFRSF1BP20333 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF1BP20333 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 ALDH1A3-203ENST00000557963 1670 ntBASIC21.01■□□□□ 0.95
TNFRSF1BP20333 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1BP20333 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21■□□□□ 0.95
TNFRSF1BP20333 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF1BP20333 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF1BP20333 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF1BP20333 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF1BP20333 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21■□□□□ 0.95
TNFRSF1BP20333 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF1BP20333 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21■□□□□ 0.95
TNFRSF1BP20333 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TNFRSF1BP20333 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TNFRSF1BP20333 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TNFRSF1BP20333 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF1BP20333 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
TNFRSF1BP20333 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21■□□□□ 0.95
TNFRSF1BP20333 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFRSF1BP20333 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
TNFRSF1BP20333 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TNFRSF1BP20333 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFRSF1BP20333 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFRSF1BP20333 AC011551.1-201ENST00000614101 683 ntBASIC20.99■□□□□ 0.95
TNFRSF1BP20333 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFRSF1BP20333 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFRSF1BP20333 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFRSF1BP20333 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF1BP20333 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF1BP20333 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF1BP20333 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF1BP20333 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF1BP20333 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF1BP20333 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF1BP20333 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.98■□□□□ 0.95
TNFRSF1BP20333 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF1BP20333 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF1BP20333 CLDN5-201ENST00000403084 2357 ntBASIC20.97■□□□□ 0.95
TNFRSF1BP20333 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.97■□□□□ 0.95
TNFRSF1BP20333 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF1BP20333 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF1BP20333 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF1BP20333 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF1BP20333 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.97■□□□□ 0.95
TNFRSF1BP20333 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.97■□□□□ 0.95
TNFRSF1BP20333 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms