Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DOBP13765 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DOBP13765 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DOBP13765 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DOBP13765 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HLA-DOBP13765 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.33■□□□□ 0.85
HLA-DOBP13765 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
HLA-DOBP13765 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.33■□□□□ 0.84
HLA-DOBP13765 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.33■□□□□ 0.84
HLA-DOBP13765 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DOBP13765 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DOBP13765 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DOBP13765 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOBP13765 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOBP13765 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HLA-DOBP13765 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOBP13765 AC239859.2-201ENST00000444165 318 ntBASIC20.32■□□□□ 0.84
HLA-DOBP13765 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.32■□□□□ 0.84
HLA-DOBP13765 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DOBP13765 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DOBP13765 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DOBP13765 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DOBP13765 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOBP13765 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.32■□□□□ 0.84
HLA-DOBP13765 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DOBP13765 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DOBP13765 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DOBP13765 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOBP13765 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HLA-DOBP13765 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOBP13765 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOBP13765 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOBP13765 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DOBP13765 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DOBP13765 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DOBP13765 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
HLA-DOBP13765 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DOBP13765 Z92544.1-202ENST00000571933 1220 ntBASIC20.3■□□□□ 0.84
HLA-DOBP13765 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HLA-DOBP13765 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DOBP13765 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOBP13765 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DOBP13765 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DOBP13765 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOBP13765 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOBP13765 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOBP13765 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.29■□□□□ 0.84
HLA-DOBP13765 KRT125P-201ENST00000546827 989 ntBASIC20.29■□□□□ 0.84
HLA-DOBP13765 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DOBP13765 MIR4787-201ENST00000607364 84 ntBASIC20.29■□□□□ 0.84
HLA-DOBP13765 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.29■□□□□ 0.84
HLA-DOBP13765 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DOBP13765 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DOBP13765 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DOBP13765 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DOBP13765 ANOS2P-203ENST00000472227 1816 ntBASIC20.28■□□□□ 0.84
HLA-DOBP13765 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DOBP13765 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DOBP13765 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DOBP13765 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DOBP13765 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.28■□□□□ 0.84
HLA-DOBP13765 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DOBP13765 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DOBP13765 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.28■□□□□ 0.84
HLA-DOBP13765 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
HLA-DOBP13765 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DOBP13765 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DOBP13765 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.27■□□□□ 0.84
HLA-DOBP13765 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.27■□□□□ 0.84
HLA-DOBP13765 DUSP8P5-201ENST00000422884 1815 ntBASIC20.27■□□□□ 0.84
HLA-DOBP13765 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DOBP13765 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.27■□□□□ 0.84
HLA-DOBP13765 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DOBP13765 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.27■□□□□ 0.84
HLA-DOBP13765 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.27■□□□□ 0.84
HLA-DOBP13765 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DOBP13765 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DOBP13765 AC092028.1-203ENST00000608262 953 ntBASIC20.27■□□□□ 0.84
HLA-DOBP13765 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HLA-DOBP13765 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
HLA-DOBP13765 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
HLA-DOBP13765 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.27■□□□□ 0.83
HLA-DOBP13765 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DOBP13765 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DOBP13765 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DOBP13765 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DOBP13765 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.26■□□□□ 0.83
HLA-DOBP13765 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.26■□□□□ 0.83
HLA-DOBP13765 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DOBP13765 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.26■□□□□ 0.83
HLA-DOBP13765 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DOBP13765 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.26■□□□□ 0.83
HLA-DOBP13765 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DOBP13765 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DOBP13765 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.26■□□□□ 0.83
HLA-DOBP13765 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HLA-DOBP13765 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.25■□□□□ 0.83
HLA-DOBP13765 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
HLA-DOBP13765 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.25■□□□□ 0.83
HLA-DOBP13765 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms