Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BMP4P12644 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.66■□□□□ 0.9
BMP4P12644 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BMP4P12644 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BMP4P12644 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BMP4P12644 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
BMP4P12644 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
BMP4P12644 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BMP4P12644 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BMP4P12644 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.65■□□□□ 0.9
BMP4P12644 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BMP4P12644 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BMP4P12644 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.65■□□□□ 0.9
BMP4P12644 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
BMP4P12644 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
BMP4P12644 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BMP4P12644 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
BMP4P12644 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BMP4P12644 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.64■□□□□ 0.9
BMP4P12644 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BMP4P12644 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BMP4P12644 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.64■□□□□ 0.89
BMP4P12644 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.64■□□□□ 0.89
BMP4P12644 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
BMP4P12644 AC087393.1-201ENST00000582896 145 ntBASIC20.64■□□□□ 0.89
BMP4P12644 MIR4508-201ENST00000584178 70 ntBASIC20.64■□□□□ 0.89
BMP4P12644 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.64■□□□□ 0.89
BMP4P12644 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BMP4P12644 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
BMP4P12644 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP4P12644 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP4P12644 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP4P12644 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.63■□□□□ 0.89
BMP4P12644 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP4P12644 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.63■□□□□ 0.89
BMP4P12644 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.63■□□□□ 0.89
BMP4P12644 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BMP4P12644 AL035685.1-201ENST00000636663 812 ntBASIC20.63■□□□□ 0.89
BMP4P12644 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BMP4P12644 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP4P12644 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
BMP4P12644 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP4P12644 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
BMP4P12644 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BMP4P12644 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
BMP4P12644 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
BMP4P12644 RPS2P7-201ENST00000447334 885 ntBASIC20.62■□□□□ 0.89
BMP4P12644 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.62■□□□□ 0.89
BMP4P12644 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BMP4P12644 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.62■□□□□ 0.89
BMP4P12644 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.62■□□□□ 0.89
BMP4P12644 AL137060.1-201ENST00000618151 2648 ntBASIC20.62■□□□□ 0.89
BMP4P12644 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
BMP4P12644 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
BMP4P12644 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
BMP4P12644 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
BMP4P12644 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP4P12644 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP4P12644 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.61■□□□□ 0.89
BMP4P12644 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP4P12644 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP4P12644 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.61■□□□□ 0.89
BMP4P12644 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP4P12644 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP4P12644 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP4P12644 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP4P12644 GUSBP5-202ENST00000510805 1989 ntBASIC20.61■□□□□ 0.89
BMP4P12644 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BMP4P12644 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BMP4P12644 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BMP4P12644 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
BMP4P12644 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.6■□□□□ 0.89
BMP4P12644 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.6■□□□□ 0.89
BMP4P12644 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BMP4P12644 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
BMP4P12644 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BMP4P12644 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BMP4P12644 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BMP4P12644 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BMP4P12644 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BMP4P12644 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BMP4P12644 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BMP4P12644 AL451085.2-201ENST00000605085 799 ntBASIC20.59■□□□□ 0.89
BMP4P12644 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BMP4P12644 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BMP4P12644 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
BMP4P12644 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.58■□□□□ 0.89
BMP4P12644 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BMP4P12644 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BMP4P12644 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BMP4P12644 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BMP4P12644 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BMP4P12644 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BMP4P12644 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BMP4P12644 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BMP4P12644 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.58■□□□□ 0.89
BMP4P12644 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BMP4P12644 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BMP4P12644 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.58■□□□□ 0.89
BMP4P12644 FOXO3B-201ENST00000395675 1928 ntBASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms