Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.25■■□□□ 1.15
CAPN1P07384 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.25■■□□□ 1.15
CAPN1P07384 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.25■■□□□ 1.15
CAPN1P07384 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.25■■□□□ 1.15
CAPN1P07384 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CAPN1P07384 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CAPN1P07384 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CAPN1P07384 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.24■■□□□ 1.15
CAPN1P07384 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CAPN1P07384 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.24■■□□□ 1.15
CAPN1P07384 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.24■■□□□ 1.15
CAPN1P07384 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CAPN1P07384 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.24■■□□□ 1.15
CAPN1P07384 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CAPN1P07384 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.24■■□□□ 1.15
CAPN1P07384 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CAPN1P07384 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.24■■□□□ 1.15
CAPN1P07384 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.24■■□□□ 1.15
CAPN1P07384 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.23■■□□□ 1.15
CAPN1P07384 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CAPN1P07384 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CAPN1P07384 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CAPN1P07384 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CAPN1P07384 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.23■■□□□ 1.15
CAPN1P07384 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.23■■□□□ 1.15
CAPN1P07384 AC092028.1-203ENST00000608262 953 ntBASIC22.23■■□□□ 1.15
CAPN1P07384 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.23■■□□□ 1.15
CAPN1P07384 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.23■■□□□ 1.15
CAPN1P07384 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CAPN1P07384 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CAPN1P07384 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CAPN1P07384 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CAPN1P07384 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.22■■□□□ 1.15
CAPN1P07384 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CAPN1P07384 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.22■■□□□ 1.15
CAPN1P07384 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CAPN1P07384 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.22■■□□□ 1.15
CAPN1P07384 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.22■■□□□ 1.15
CAPN1P07384 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CAPN1P07384 AL161729.1-201ENST00000604104 1402 ntBASIC22.22■■□□□ 1.15
CAPN1P07384 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CAPN1P07384 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CAPN1P07384 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CAPN1P07384 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.21■■□□□ 1.15
CAPN1P07384 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
CAPN1P07384 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CAPN1P07384 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CAPN1P07384 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CAPN1P07384 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CAPN1P07384 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.21■■□□□ 1.15
CAPN1P07384 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CAPN1P07384 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CAPN1P07384 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CAPN1P07384 AC068473.5-201ENST00000616428 2072 ntBASIC22.21■■□□□ 1.15
CAPN1P07384 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CAPN1P07384 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.2■■□□□ 1.14
CAPN1P07384 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CAPN1P07384 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CAPN1P07384 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CAPN1P07384 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CAPN1P07384 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.2■■□□□ 1.14
CAPN1P07384 KRT16P3-201ENST00000439127 1283 ntBASIC22.2■■□□□ 1.14
CAPN1P07384 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CAPN1P07384 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CAPN1P07384 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CAPN1P07384 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CAPN1P07384 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CAPN1P07384 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CAPN1P07384 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.19■■□□□ 1.14
CAPN1P07384 TSPY9P-201ENST00000440215 945 ntBASIC22.19■■□□□ 1.14
CAPN1P07384 TSPY11P-201ENST00000442607 1045 ntBASIC22.19■■□□□ 1.14
CAPN1P07384 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.19■■□□□ 1.14
CAPN1P07384 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.19■■□□□ 1.14
CAPN1P07384 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CAPN1P07384 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CAPN1P07384 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.18■■□□□ 1.14
CAPN1P07384 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
CAPN1P07384 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.18■■□□□ 1.14
CAPN1P07384 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.18■■□□□ 1.14
CAPN1P07384 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.18■■□□□ 1.14
CAPN1P07384 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CAPN1P07384 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.18■■□□□ 1.14
CAPN1P07384 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN1P07384 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN1P07384 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN1P07384 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CAPN1P07384 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CAPN1P07384 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.17■■□□□ 1.14
CAPN1P07384 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CAPN1P07384 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CAPN1P07384 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CAPN1P07384 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.17■■□□□ 1.14
CAPN1P07384 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.17■■□□□ 1.14
CAPN1P07384 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.17■■□□□ 1.14
CAPN1P07384 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CAPN1P07384 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.17■■□□□ 1.14
CAPN1P07384 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CAPN1P07384 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CAPN1P07384 AL022069.1-201ENST00000568025 1636 ntBASIC22.17■■□□□ 1.14
CAPN1P07384 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms