Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 AC233723.2-201ENST00000623798 2106 ntBASIC20.32■□□□□ 0.84
GYPBP06028 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.32■□□□□ 0.84
GYPBP06028 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.32■□□□□ 0.84
GYPBP06028 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GYPBP06028 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GYPBP06028 AC139795.1-202ENST00000500444 432 ntBASIC20.32■□□□□ 0.84
GYPBP06028 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.32■□□□□ 0.84
GYPBP06028 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.32■□□□□ 0.84
GYPBP06028 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
GYPBP06028 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GYPBP06028 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GYPBP06028 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GYPBP06028 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GYPBP06028 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GYPBP06028 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GYPBP06028 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
GYPBP06028 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GYPBP06028 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.31■□□□□ 0.84
GYPBP06028 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GYPBP06028 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.31■□□□□ 0.84
GYPBP06028 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.31■□□□□ 0.84
GYPBP06028 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.31■□□□□ 0.84
GYPBP06028 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GYPBP06028 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
GYPBP06028 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GYPBP06028 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GYPBP06028 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GYPBP06028 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GYPBP06028 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GYPBP06028 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GYPBP06028 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GYPBP06028 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GYPBP06028 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GYPBP06028 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GYPBP06028 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GYPBP06028 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.3■□□□□ 0.84
GYPBP06028 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.3■□□□□ 0.84
GYPBP06028 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GYPBP06028 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GYPBP06028 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
GYPBP06028 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GYPBP06028 AL117328.2-201ENST00000624617 1940 ntBASIC20.29■□□□□ 0.84
GYPBP06028 ALDH1A3-203ENST00000557963 1670 ntBASIC20.29■□□□□ 0.84
GYPBP06028 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GYPBP06028 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.29■□□□□ 0.84
GYPBP06028 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GYPBP06028 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.29■□□□□ 0.84
GYPBP06028 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.29■□□□□ 0.84
GYPBP06028 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.29■□□□□ 0.84
GYPBP06028 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GYPBP06028 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GYPBP06028 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GYPBP06028 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GYPBP06028 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GYPBP06028 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.28■□□□□ 0.84
GYPBP06028 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GYPBP06028 ABHD17AP5-201ENST00000580133 923 ntBASIC20.28■□□□□ 0.84
GYPBP06028 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GYPBP06028 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
GYPBP06028 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
GYPBP06028 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GYPBP06028 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GYPBP06028 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GYPBP06028 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GYPBP06028 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
GYPBP06028 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
GYPBP06028 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GYPBP06028 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
GYPBP06028 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GYPBP06028 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
GYPBP06028 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
GYPBP06028 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
GYPBP06028 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GYPBP06028 NTF6A-201ENST00000591175 560 ntBASIC20.27■□□□□ 0.84
GYPBP06028 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
GYPBP06028 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
GYPBP06028 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GYPBP06028 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GYPBP06028 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GYPBP06028 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GYPBP06028 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GYPBP06028 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
GYPBP06028 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GYPBP06028 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GYPBP06028 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GYPBP06028 EP400NL-214ENST00000641289 2402 ntBASIC20.26■□□□□ 0.83
GYPBP06028 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.26■□□□□ 0.83
GYPBP06028 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GYPBP06028 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.25■□□□□ 0.83
GYPBP06028 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GYPBP06028 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
GYPBP06028 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
GYPBP06028 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GYPBP06028 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.25■□□□□ 0.83
GYPBP06028 AC019171.1-201ENST00000601251 1056 ntBASIC20.25■□□□□ 0.83
GYPBP06028 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
GYPBP06028 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
GYPBP06028 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GYPBP06028 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GYPBP06028 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms