Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DPB1P04440 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DPB1P04440 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DPB1P04440 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DPB1P04440 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DPB1P04440 LINC00526-201ENST00000581067 1875 ntBASIC20.29■□□□□ 0.84
HLA-DPB1P04440 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DPB1P04440 KRT18P10-201ENST00000388836 1287 ntBASIC20.29■□□□□ 0.84
HLA-DPB1P04440 ATP5G2P3-201ENST00000429083 425 ntBASIC20.29■□□□□ 0.84
HLA-DPB1P04440 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DPB1P04440 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HLA-DPB1P04440 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HLA-DPB1P04440 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DPB1P04440 AC127496.7-201ENST00000625110 1798 ntBASIC20.29■□□□□ 0.84
HLA-DPB1P04440 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DPB1P04440 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DPB1P04440 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.28■□□□□ 0.84
HLA-DPB1P04440 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HLA-DPB1P04440 AC012354.3-201ENST00000623734 483 ntBASIC20.28■□□□□ 0.84
HLA-DPB1P04440 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.28■□□□□ 0.84
HLA-DPB1P04440 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DPB1P04440 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DPB1P04440 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HLA-DPB1P04440 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DPB1P04440 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DPB1P04440 RPS2P7-201ENST00000447334 885 ntBASIC20.27■□□□□ 0.84
HLA-DPB1P04440 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.27■□□□□ 0.84
HLA-DPB1P04440 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HLA-DPB1P04440 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.27■□□□□ 0.84
HLA-DPB1P04440 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.27■□□□□ 0.84
HLA-DPB1P04440 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DPB1P04440 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HLA-DPB1P04440 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HLA-DPB1P04440 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HLA-DPB1P04440 GUSBP5-202ENST00000510805 1989 ntBASIC20.26■□□□□ 0.83
HLA-DPB1P04440 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPB1P04440 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPB1P04440 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HLA-DPB1P04440 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPB1P04440 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPB1P04440 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.26■□□□□ 0.83
HLA-DPB1P04440 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.26■□□□□ 0.83
HLA-DPB1P04440 AL033527.3-201ENST00000566366 1196 ntBASIC20.26■□□□□ 0.83
HLA-DPB1P04440 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HLA-DPB1P04440 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPB1P04440 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPB1P04440 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPB1P04440 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DPB1P04440 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 TSPY13P-201ENST00000338964 914 ntBASIC20.25■□□□□ 0.83
HLA-DPB1P04440 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
HLA-DPB1P04440 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPB1P04440 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPB1P04440 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPB1P04440 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HLA-DPB1P04440 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HLA-DPB1P04440 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPB1P04440 AC137767.1-201ENST00000602918 1920 ntBASIC20.24■□□□□ 0.83
HLA-DPB1P04440 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPB1P04440 AC087393.1-201ENST00000582896 145 ntBASIC20.24■□□□□ 0.83
HLA-DPB1P04440 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPB1P04440 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPB1P04440 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DPB1P04440 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DPB1P04440 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPB1P04440 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPB1P04440 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPB1P04440 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DPB1P04440 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms