Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD74P04233 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.11■□□□□ 0.65
CD74P04233 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CD74P04233 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.11■□□□□ 0.65
CD74P04233 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD74P04233 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD74P04233 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD74P04233 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD74P04233 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD74P04233 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CD74P04233 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD74P04233 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.1■□□□□ 0.65
CD74P04233 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD74P04233 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.1■□□□□ 0.65
CD74P04233 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.1■□□□□ 0.65
CD74P04233 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD74P04233 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.09■□□□□ 0.65
CD74P04233 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD74P04233 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD74P04233 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD74P04233 AC090877.2-201ENST00000558441 1738 ntBASIC19.09■□□□□ 0.65
CD74P04233 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD74P04233 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.09■□□□□ 0.65
CD74P04233 ECEL1P2-201ENST00000461596 1295 ntBASIC19.09■□□□□ 0.65
CD74P04233 MIR3648-2-201ENST00000581792 180 ntBASIC19.09■□□□□ 0.65
CD74P04233 MIR3648-1-201ENST00000615959 180 ntBASIC19.09■□□□□ 0.65
CD74P04233 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD74P04233 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.09■□□□□ 0.65
CD74P04233 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD74P04233 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD74P04233 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CD74P04233 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CD74P04233 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD74P04233 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD74P04233 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD74P04233 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.08■□□□□ 0.65
CD74P04233 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.08■□□□□ 0.64
CD74P04233 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD74P04233 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CD74P04233 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD74P04233 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD74P04233 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.08■□□□□ 0.64
CD74P04233 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD74P04233 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD74P04233 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD74P04233 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CD74P04233 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.07■□□□□ 0.64
CD74P04233 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD74P04233 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CD74P04233 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD74P04233 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CD74P04233 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD74P04233 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD74P04233 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD74P04233 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CD74P04233 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
CD74P04233 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
CD74P04233 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD74P04233 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.06■□□□□ 0.64
CD74P04233 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD74P04233 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD74P04233 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.06■□□□□ 0.64
CD74P04233 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.06■□□□□ 0.64
CD74P04233 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD74P04233 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD74P04233 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD74P04233 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD74P04233 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CD74P04233 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.05■□□□□ 0.64
CD74P04233 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CD74P04233 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD74P04233 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD74P04233 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD74P04233 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD74P04233 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.05■□□□□ 0.64
CD74P04233 RAP2CP1-202ENST00000605179 643 ntBASIC19.05■□□□□ 0.64
CD74P04233 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.05■□□□□ 0.64
CD74P04233 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD74P04233 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD74P04233 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD74P04233 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CD74P04233 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CD74P04233 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CD74P04233 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CD74P04233 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.04■□□□□ 0.64
CD74P04233 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.04■□□□□ 0.64
CD74P04233 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD74P04233 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD74P04233 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.04■□□□□ 0.64
CD74P04233 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD74P04233 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD74P04233 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.04■□□□□ 0.64
CD74P04233 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD74P04233 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD74P04233 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD74P04233 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
CD74P04233 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD74P04233 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD74P04233 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD74P04233 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms