Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIX6O95475 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIX6O95475 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.96■□□□□ 0.63
SIX6O95475 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIX6O95475 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIX6O95475 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.96■□□□□ 0.63
SIX6O95475 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.96■□□□□ 0.63
SIX6O95475 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIX6O95475 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
SIX6O95475 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.96■□□□□ 0.63
SIX6O95475 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIX6O95475 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SIX6O95475 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.96■□□□□ 0.63
SIX6O95475 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX6O95475 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.95■□□□□ 0.62
SIX6O95475 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX6O95475 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.95■□□□□ 0.62
SIX6O95475 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
SIX6O95475 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIX6O95475 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SIX6O95475 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.95■□□□□ 0.62
SIX6O95475 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX6O95475 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SIX6O95475 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SIX6O95475 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.95■□□□□ 0.62
SIX6O95475 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX6O95475 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX6O95475 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX6O95475 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX6O95475 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX6O95475 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.94■□□□□ 0.62
SIX6O95475 AC148477.6-201ENST00000623746 465 ntBASIC18.94■□□□□ 0.62
SIX6O95475 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX6O95475 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SIX6O95475 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX6O95475 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SIX6O95475 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX6O95475 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX6O95475 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX6O95475 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.93■□□□□ 0.62
SIX6O95475 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX6O95475 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.93■□□□□ 0.62
SIX6O95475 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIX6O95475 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIX6O95475 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX6O95475 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX6O95475 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.93■□□□□ 0.62
SIX6O95475 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.93■□□□□ 0.62
SIX6O95475 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.93■□□□□ 0.62
SIX6O95475 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
SIX6O95475 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX6O95475 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.93■□□□□ 0.62
SIX6O95475 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX6O95475 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX6O95475 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
SIX6O95475 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX6O95475 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SIX6O95475 AC021231.2-201ENST00000594613 730 ntBASIC18.92■□□□□ 0.62
SIX6O95475 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX6O95475 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.92■□□□□ 0.62
SIX6O95475 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SIX6O95475 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX6O95475 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX6O95475 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
SIX6O95475 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.91■□□□□ 0.62
SIX6O95475 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIX6O95475 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.91■□□□□ 0.62
SIX6O95475 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX6O95475 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SIX6O95475 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX6O95475 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.91■□□□□ 0.62
SIX6O95475 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX6O95475 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIX6O95475 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIX6O95475 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX6O95475 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIX6O95475 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX6O95475 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.9■□□□□ 0.62
SIX6O95475 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX6O95475 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX6O95475 AC008813.1-201ENST00000536597 885 ntBASIC18.9■□□□□ 0.62
SIX6O95475 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX6O95475 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIX6O95475 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.89■□□□□ 0.61
SIX6O95475 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SIX6O95475 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX6O95475 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX6O95475 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX6O95475 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX6O95475 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SIX6O95475 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.89■□□□□ 0.61
SIX6O95475 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX6O95475 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.89■□□□□ 0.61
SIX6O95475 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX6O95475 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.89■□□□□ 0.61
SIX6O95475 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.89■□□□□ 0.61
SIX6O95475 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIX6O95475 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX6O95475 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX6O95475 AC073130.3-201ENST00000624389 2278 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms