Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
GPC4O75487 AC021242.3-201ENST00000607598 1377 ntBASIC22.6■■□□□ 1.21
GPC4O75487 AL022069.1-201ENST00000568025 1636 ntBASIC22.6■■□□□ 1.21
GPC4O75487 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.6■■□□□ 1.21
GPC4O75487 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
GPC4O75487 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
GPC4O75487 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
GPC4O75487 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
GPC4O75487 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
GPC4O75487 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
GPC4O75487 BX664725.1-201ENST00000438252 379 ntBASIC22.59■■□□□ 1.21
GPC4O75487 Z92544.1-202ENST00000571933 1220 ntBASIC22.59■■□□□ 1.21
GPC4O75487 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
GPC4O75487 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
GPC4O75487 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
GPC4O75487 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.58■■□□□ 1.21
GPC4O75487 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.58■■□□□ 1.21
GPC4O75487 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
GPC4O75487 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
GPC4O75487 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.58■■□□□ 1.21
GPC4O75487 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.58■■□□□ 1.21
GPC4O75487 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
GPC4O75487 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
GPC4O75487 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.58■■□□□ 1.2
GPC4O75487 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
GPC4O75487 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
GPC4O75487 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
GPC4O75487 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.57■■□□□ 1.2
GPC4O75487 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
GPC4O75487 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.57■■□□□ 1.2
GPC4O75487 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.57■■□□□ 1.2
GPC4O75487 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.57■■□□□ 1.2
GPC4O75487 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
GPC4O75487 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
GPC4O75487 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.57■■□□□ 1.2
GPC4O75487 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GPC4O75487 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.57■■□□□ 1.2
GPC4O75487 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
GPC4O75487 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.57■■□□□ 1.2
GPC4O75487 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
GPC4O75487 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.56■■□□□ 1.2
GPC4O75487 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.56■■□□□ 1.2
GPC4O75487 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GPC4O75487 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
GPC4O75487 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GPC4O75487 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.56■■□□□ 1.2
GPC4O75487 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.56■■□□□ 1.2
GPC4O75487 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.56■■□□□ 1.2
GPC4O75487 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GPC4O75487 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.55■■□□□ 1.2
GPC4O75487 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
GPC4O75487 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
GPC4O75487 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
GPC4O75487 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
GPC4O75487 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
GPC4O75487 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
GPC4O75487 AC004448.1-201ENST00000458332 883 ntBASIC22.54■■□□□ 1.2
GPC4O75487 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.54■■□□□ 1.2
GPC4O75487 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GPC4O75487 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
GPC4O75487 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
GPC4O75487 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
GPC4O75487 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
GPC4O75487 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
GPC4O75487 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
GPC4O75487 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.53■■□□□ 1.2
GPC4O75487 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
GPC4O75487 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.53■■□□□ 1.2
GPC4O75487 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
GPC4O75487 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
GPC4O75487 AL035685.1-201ENST00000636663 812 ntBASIC22.53■■□□□ 1.2
GPC4O75487 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
GPC4O75487 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GPC4O75487 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GPC4O75487 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GPC4O75487 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
GPC4O75487 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.52■■□□□ 1.2
GPC4O75487 AC239859.2-201ENST00000444165 318 ntBASIC22.52■■□□□ 1.2
GPC4O75487 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.52■■□□□ 1.2
GPC4O75487 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.19
GPC4O75487 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GPC4O75487 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
GPC4O75487 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
GPC4O75487 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.51■■□□□ 1.19
GPC4O75487 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
GPC4O75487 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.51■■□□□ 1.19
GPC4O75487 SNX5-217ENST00000606557 1087 ntBASIC22.51■■□□□ 1.19
GPC4O75487 PKD1P6-201ENST00000343738 4769 ntBASIC22.51■■□□□ 1.19
GPC4O75487 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
GPC4O75487 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.5■■□□□ 1.19
GPC4O75487 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
GPC4O75487 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
GPC4O75487 KRT125P-201ENST00000546827 989 ntBASIC22.5■■□□□ 1.19
GPC4O75487 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.5■■□□□ 1.19
GPC4O75487 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GPC4O75487 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.5■■□□□ 1.19
GPC4O75487 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
GPC4O75487 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GPC4O75487 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GPC4O75487 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms