Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KLF4O43474 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KLF4O43474 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.75■□□□□ 0.91
KLF4O43474 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.75■□□□□ 0.91
KLF4O43474 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.75■□□□□ 0.91
KLF4O43474 Z92544.1-202ENST00000571933 1220 ntBASIC20.75■□□□□ 0.91
KLF4O43474 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.75■□□□□ 0.91
KLF4O43474 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.75■□□□□ 0.91
KLF4O43474 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
KLF4O43474 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
KLF4O43474 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLF4O43474 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLF4O43474 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLF4O43474 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLF4O43474 KRT18P24-201ENST00000344739 1156 ntBASIC20.74■□□□□ 0.91
KLF4O43474 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KLF4O43474 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLF4O43474 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLF4O43474 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLF4O43474 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
KLF4O43474 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
KLF4O43474 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
KLF4O43474 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.73■□□□□ 0.91
KLF4O43474 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.73■□□□□ 0.91
KLF4O43474 AC011551.1-201ENST00000614101 683 ntBASIC20.73■□□□□ 0.91
KLF4O43474 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLF4O43474 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KLF4O43474 AL022069.1-201ENST00000568025 1636 ntBASIC20.72■□□□□ 0.91
KLF4O43474 THA1P-201ENST00000590384 1145 ntBASIC20.72■□□□□ 0.91
KLF4O43474 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KLF4O43474 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
KLF4O43474 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.71■□□□□ 0.91
KLF4O43474 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.71■□□□□ 0.91
KLF4O43474 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KLF4O43474 AC131212.1-201ENST00000613771 668 ntBASIC20.71■□□□□ 0.91
KLF4O43474 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
KLF4O43474 AC131274.2-201ENST00000580697 1507 ntBASIC20.71■□□□□ 0.91
KLF4O43474 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KLF4O43474 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.71■□□□□ 0.91
KLF4O43474 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLF4O43474 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
KLF4O43474 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KLF4O43474 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
KLF4O43474 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KLF4O43474 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KLF4O43474 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.7■□□□□ 0.9
KLF4O43474 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
KLF4O43474 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KLF4O43474 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KLF4O43474 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.69■□□□□ 0.9
KLF4O43474 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KLF4O43474 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.69■□□□□ 0.9
KLF4O43474 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KLF4O43474 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KLF4O43474 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KLF4O43474 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLF4O43474 AL356441.2-201ENST00000443009 864 ntBASIC20.69■□□□□ 0.9
KLF4O43474 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.69■□□□□ 0.9
KLF4O43474 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KLF4O43474 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLF4O43474 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KLF4O43474 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLF4O43474 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLF4O43474 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLF4O43474 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLF4O43474 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.68■□□□□ 0.9
KLF4O43474 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLF4O43474 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLF4O43474 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLF4O43474 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLF4O43474 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLF4O43474 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLF4O43474 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.68■□□□□ 0.9
KLF4O43474 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.68■□□□□ 0.9
KLF4O43474 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.68■□□□□ 0.9
KLF4O43474 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.68■□□□□ 0.9
KLF4O43474 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
KLF4O43474 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLF4O43474 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLF4O43474 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
KLF4O43474 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLF4O43474 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLF4O43474 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.67■□□□□ 0.9
KLF4O43474 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLF4O43474 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
KLF4O43474 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.67■□□□□ 0.9
KLF4O43474 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLF4O43474 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLF4O43474 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLF4O43474 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
KLF4O43474 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLF4O43474 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
KLF4O43474 BX664725.1-201ENST00000438252 379 ntBASIC20.66■□□□□ 0.9
KLF4O43474 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.66■□□□□ 0.9
KLF4O43474 AC120024.1-201ENST00000562672 995 ntBASIC20.66■□□□□ 0.9
KLF4O43474 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
KLF4O43474 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.66■□□□□ 0.9
KLF4O43474 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLF4O43474 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLF4O43474 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms