Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYRM1O43325 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYRM1O43325 DUX4L28-201ENST00000623687 678 ntBASIC19.52■□□□□ 0.72
LYRM1O43325 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LYRM1O43325 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LYRM1O43325 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
LYRM1O43325 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
LYRM1O43325 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
LYRM1O43325 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.51■□□□□ 0.71
LYRM1O43325 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYRM1O43325 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.51■□□□□ 0.71
LYRM1O43325 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYRM1O43325 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYRM1O43325 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYRM1O43325 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LYRM1O43325 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LYRM1O43325 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LYRM1O43325 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYRM1O43325 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.51■□□□□ 0.71
LYRM1O43325 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LYRM1O43325 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYRM1O43325 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYRM1O43325 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.5■□□□□ 0.71
LYRM1O43325 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYRM1O43325 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYRM1O43325 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LYRM1O43325 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYRM1O43325 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.5■□□□□ 0.71
LYRM1O43325 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYRM1O43325 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYRM1O43325 AC073130.3-201ENST00000624389 2278 ntBASIC19.49■□□□□ 0.71
LYRM1O43325 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LYRM1O43325 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LYRM1O43325 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
LYRM1O43325 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LYRM1O43325 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYRM1O43325 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYRM1O43325 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.49■□□□□ 0.71
LYRM1O43325 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYRM1O43325 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYRM1O43325 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYRM1O43325 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.49■□□□□ 0.71
LYRM1O43325 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LYRM1O43325 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LYRM1O43325 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LYRM1O43325 C11orf96-202ENST00000528572 1834 ntBASIC19.48■□□□□ 0.71
LYRM1O43325 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LYRM1O43325 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYRM1O43325 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYRM1O43325 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.48■□□□□ 0.71
LYRM1O43325 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.48■□□□□ 0.71
LYRM1O43325 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.47■□□□□ 0.71
LYRM1O43325 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.47■□□□□ 0.71
LYRM1O43325 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYRM1O43325 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYRM1O43325 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYRM1O43325 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYRM1O43325 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYRM1O43325 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYRM1O43325 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYRM1O43325 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYRM1O43325 FBXW4P1-201ENST00000426721 2239 ntBASIC19.47■□□□□ 0.71
LYRM1O43325 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LYRM1O43325 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYRM1O43325 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.46■□□□□ 0.71
LYRM1O43325 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LYRM1O43325 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYRM1O43325 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.46■□□□□ 0.71
LYRM1O43325 AC148477.6-201ENST00000623746 465 ntBASIC19.46■□□□□ 0.71
LYRM1O43325 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LYRM1O43325 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYRM1O43325 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.46■□□□□ 0.71
LYRM1O43325 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYRM1O43325 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYRM1O43325 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYRM1O43325 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LYRM1O43325 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LYRM1O43325 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYRM1O43325 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.44■□□□□ 0.7
LYRM1O43325 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYRM1O43325 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYRM1O43325 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYRM1O43325 AC092053.2-201ENST00000640557 1818 ntBASIC19.44■□□□□ 0.7
LYRM1O43325 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYRM1O43325 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.44■□□□□ 0.7
LYRM1O43325 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
LYRM1O43325 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYRM1O43325 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYRM1O43325 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYRM1O43325 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYRM1O43325 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LYRM1O43325 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LYRM1O43325 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYRM1O43325 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYRM1O43325 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LYRM1O43325 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.44■□□□□ 0.7
LYRM1O43325 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
LYRM1O43325 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYRM1O43325 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.43■□□□□ 0.7
LYRM1O43325 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms