Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.09■□□□□ 0.97
AP3D1O14617 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.09■□□□□ 0.97
AP3D1O14617 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AP3D1O14617 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AP3D1O14617 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP3D1O14617 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP3D1O14617 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP3D1O14617 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
AP3D1O14617 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP3D1O14617 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP3D1O14617 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP3D1O14617 MIR4508-201ENST00000584178 70 ntBASIC21.08■□□□□ 0.97
AP3D1O14617 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.08■□□□□ 0.96
AP3D1O14617 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
AP3D1O14617 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
AP3D1O14617 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.08■□□□□ 0.96
AP3D1O14617 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
AP3D1O14617 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.08■□□□□ 0.96
AP3D1O14617 AL022069.1-201ENST00000568025 1636 ntBASIC21.07■□□□□ 0.96
AP3D1O14617 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3D1O14617 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
AP3D1O14617 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
AP3D1O14617 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3D1O14617 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3D1O14617 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP3D1O14617 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.07■□□□□ 0.96
AP3D1O14617 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AP3D1O14617 THA1P-201ENST00000590384 1145 ntBASIC21.07■□□□□ 0.96
AP3D1O14617 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.07■□□□□ 0.96
AP3D1O14617 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3D1O14617 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
AP3D1O14617 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP3D1O14617 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3D1O14617 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
AP3D1O14617 KRT18P24-201ENST00000344739 1156 ntBASIC21.06■□□□□ 0.96
AP3D1O14617 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.06■□□□□ 0.96
AP3D1O14617 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3D1O14617 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3D1O14617 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
AP3D1O14617 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP3D1O14617 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.05■□□□□ 0.96
AP3D1O14617 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
AP3D1O14617 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP3D1O14617 MIR4281-201ENST00000580852 62 ntBASIC21.05■□□□□ 0.96
AP3D1O14617 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP3D1O14617 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.05■□□□□ 0.96
AP3D1O14617 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.05■□□□□ 0.96
AP3D1O14617 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP3D1O14617 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3D1O14617 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP3D1O14617 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP3D1O14617 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.04■□□□□ 0.96
AP3D1O14617 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3D1O14617 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3D1O14617 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3D1O14617 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP3D1O14617 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.03■□□□□ 0.96
AP3D1O14617 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP3D1O14617 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
AP3D1O14617 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP3D1O14617 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.03■□□□□ 0.96
AP3D1O14617 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
AP3D1O14617 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3D1O14617 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3D1O14617 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3D1O14617 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3D1O14617 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.02■□□□□ 0.96
AP3D1O14617 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.02■□□□□ 0.96
AP3D1O14617 AC103724.3-201ENST00000564481 992 ntBASIC21.02■□□□□ 0.96
AP3D1O14617 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3D1O14617 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.02■□□□□ 0.96
AP3D1O14617 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
AP3D1O14617 AC131274.2-201ENST00000580697 1507 ntBASIC21.02■□□□□ 0.96
AP3D1O14617 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.02■□□□□ 0.95
AP3D1O14617 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
AP3D1O14617 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
AP3D1O14617 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.02■□□□□ 0.95
AP3D1O14617 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3D1O14617 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
AP3D1O14617 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3D1O14617 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3D1O14617 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3D1O14617 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3D1O14617 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP3D1O14617 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.01■□□□□ 0.95
AP3D1O14617 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP3D1O14617 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3D1O14617 AF131216.4-201ENST00000638924 1588 ntBASIC21.01■□□□□ 0.95
AP3D1O14617 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.01■□□□□ 0.95
AP3D1O14617 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP3D1O14617 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP3D1O14617 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
AP3D1O14617 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21■□□□□ 0.95
AP3D1O14617 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21■□□□□ 0.95
AP3D1O14617 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP3D1O14617 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
AP3D1O14617 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP3D1O14617 YBX1P4-201ENST00000392794 808 ntBASIC21■□□□□ 0.95
AP3D1O14617 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21■□□□□ 0.95
AP3D1O14617 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms