Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
FOXE1O00358 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXE1O00358 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXE1O00358 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXE1O00358 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
FOXE1O00358 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXE1O00358 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.69■■□□□ 1.06
FOXE1O00358 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.69■■□□□ 1.06
FOXE1O00358 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
FOXE1O00358 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXE1O00358 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXE1O00358 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXE1O00358 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXE1O00358 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXE1O00358 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXE1O00358 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXE1O00358 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXE1O00358 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.68■■□□□ 1.06
FOXE1O00358 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
FOXE1O00358 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXE1O00358 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXE1O00358 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXE1O00358 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXE1O00358 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
FOXE1O00358 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
FOXE1O00358 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXE1O00358 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXE1O00358 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXE1O00358 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXE1O00358 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXE1O00358 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
FOXE1O00358 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.67■■□□□ 1.06
FOXE1O00358 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
FOXE1O00358 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.67■■□□□ 1.06
FOXE1O00358 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXE1O00358 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXE1O00358 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXE1O00358 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FOXE1O00358 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
FOXE1O00358 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXE1O00358 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXE1O00358 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
FOXE1O00358 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXE1O00358 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXE1O00358 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.66■■□□□ 1.06
FOXE1O00358 KRT125P-201ENST00000546827 989 ntBASIC21.66■■□□□ 1.06
FOXE1O00358 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXE1O00358 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXE1O00358 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXE1O00358 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXE1O00358 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXE1O00358 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.66■■□□□ 1.06
FOXE1O00358 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
FOXE1O00358 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.65■■□□□ 1.06
FOXE1O00358 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXE1O00358 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.65■■□□□ 1.06
FOXE1O00358 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXE1O00358 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXE1O00358 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
FOXE1O00358 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXE1O00358 AC092028.1-203ENST00000608262 953 ntBASIC21.65■■□□□ 1.06
FOXE1O00358 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXE1O00358 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXE1O00358 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXE1O00358 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXE1O00358 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXE1O00358 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.64■■□□□ 1.06
FOXE1O00358 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.64■■□□□ 1.06
FOXE1O00358 DUSP8P3-201ENST00000399571 1760 ntBASIC21.64■■□□□ 1.06
FOXE1O00358 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
FOXE1O00358 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.64■■□□□ 1.05
FOXE1O00358 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXE1O00358 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXE1O00358 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXE1O00358 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.64■■□□□ 1.05
FOXE1O00358 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXE1O00358 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.64■■□□□ 1.05
FOXE1O00358 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.64■■□□□ 1.05
FOXE1O00358 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
FOXE1O00358 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXE1O00358 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXE1O00358 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXE1O00358 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXE1O00358 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXE1O00358 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXE1O00358 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXE1O00358 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXE1O00358 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXE1O00358 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXE1O00358 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXE1O00358 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXE1O00358 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.62■■□□□ 1.05
FOXE1O00358 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
FOXE1O00358 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXE1O00358 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.62■■□□□ 1.05
FOXE1O00358 AC009299.2-201ENST00000482477 511 ntBASIC21.62■■□□□ 1.05
FOXE1O00358 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXE1O00358 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXE1O00358 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.61■■□□□ 1.05
FOXE1O00358 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms