Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SIRPB1O00241 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIRPB1O00241 AL031848.2-201ENST00000607670 837 ntBASIC19.12■□□□□ 0.65
SIRPB1O00241 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SIRPB1O00241 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.12■□□□□ 0.65
SIRPB1O00241 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SIRPB1O00241 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.12■□□□□ 0.65
SIRPB1O00241 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.11■□□□□ 0.65
SIRPB1O00241 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIRPB1O00241 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SIRPB1O00241 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SIRPB1O00241 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIRPB1O00241 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SIRPB1O00241 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIRPB1O00241 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.11■□□□□ 0.65
SIRPB1O00241 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.11■□□□□ 0.65
SIRPB1O00241 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIRPB1O00241 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIRPB1O00241 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SIRPB1O00241 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIRPB1O00241 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.11■□□□□ 0.65
SIRPB1O00241 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIRPB1O00241 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIRPB1O00241 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIRPB1O00241 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.1■□□□□ 0.65
SIRPB1O00241 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.1■□□□□ 0.65
SIRPB1O00241 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIRPB1O00241 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIRPB1O00241 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.1■□□□□ 0.65
SIRPB1O00241 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIRPB1O00241 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.1■□□□□ 0.65
SIRPB1O00241 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.1■□□□□ 0.65
SIRPB1O00241 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIRPB1O00241 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIRPB1O00241 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIRPB1O00241 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIRPB1O00241 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIRPB1O00241 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIRPB1O00241 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.09■□□□□ 0.65
SIRPB1O00241 ANOS2P-203ENST00000472227 1816 ntBASIC19.09■□□□□ 0.65
SIRPB1O00241 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIRPB1O00241 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.09■□□□□ 0.65
SIRPB1O00241 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.09■□□□□ 0.65
SIRPB1O00241 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SIRPB1O00241 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIRPB1O00241 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.09■□□□□ 0.65
SIRPB1O00241 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SIRPB1O00241 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.08■□□□□ 0.65
SIRPB1O00241 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIRPB1O00241 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SIRPB1O00241 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIRPB1O00241 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIRPB1O00241 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SIRPB1O00241 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.08■□□□□ 0.64
SIRPB1O00241 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.08■□□□□ 0.64
SIRPB1O00241 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SIRPB1O00241 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIRPB1O00241 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIRPB1O00241 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPB1O00241 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SIRPB1O00241 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SIRPB1O00241 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPB1O00241 AC004448.1-201ENST00000458332 883 ntBASIC19.07■□□□□ 0.64
SIRPB1O00241 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.07■□□□□ 0.64
SIRPB1O00241 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPB1O00241 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPB1O00241 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIRPB1O00241 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPB1O00241 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.06■□□□□ 0.64
SIRPB1O00241 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.06■□□□□ 0.64
SIRPB1O00241 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPB1O00241 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPB1O00241 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.06■□□□□ 0.64
SIRPB1O00241 AC133561.1-201ENST00000568600 2415 ntBASIC19.06■□□□□ 0.64
SIRPB1O00241 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.06■□□□□ 0.64
SIRPB1O00241 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIRPB1O00241 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SIRPB1O00241 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.06■□□□□ 0.64
SIRPB1O00241 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPB1O00241 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.05■□□□□ 0.64
SIRPB1O00241 C9orf163-202ENST00000624034 2573 ntBASIC19.05■□□□□ 0.64
SIRPB1O00241 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.05■□□□□ 0.64
SIRPB1O00241 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SIRPB1O00241 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPB1O00241 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPB1O00241 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.05■□□□□ 0.64
SIRPB1O00241 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPB1O00241 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPB1O00241 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.05■□□□□ 0.64
SIRPB1O00241 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
SIRPB1O00241 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPB1O00241 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPB1O00241 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIRPB1O00241 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SIRPB1O00241 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIRPB1O00241 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIRPB1O00241 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.04■□□□□ 0.64
SIRPB1O00241 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.04■□□□□ 0.64
SIRPB1O00241 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SIRPB1O00241 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms