Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.44■□□□□ 0.06
LINC00959A0A1B0GUT2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00959A0A1B0GUT2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00959A0A1B0GUT2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 DUX4L18-201ENST00000553347 1267 ntBASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 AL117328.2-201ENST00000624617 1940 ntBASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00959A0A1B0GUT2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 AC233723.2-201ENST00000623798 2106 ntBASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC00959A0A1B0GUT2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 ABHD17AP5-201ENST00000580133 923 ntBASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 BHLHE23-202ENST00000612929 1109 ntBASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00959A0A1B0GUT2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00959A0A1B0GUT2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00959A0A1B0GUT2 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.38■□□□□ 0.05
LINC00959A0A1B0GUT2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.38■□□□□ 0.05
LINC00959A0A1B0GUT2 NTF6A-201ENST00000591175 560 ntBASIC15.38■□□□□ 0.05
LINC00959A0A1B0GUT2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.38■□□□□ 0.05
LINC00959A0A1B0GUT2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.38■□□□□ 0.05
LINC00959A0A1B0GUT2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.38■□□□□ 0.05
LINC00959A0A1B0GUT2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms