Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV27A0A0K0K1C4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV27A0A0K0K1C4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 ESRRAP2-201ENST00000418437 1549 ntBASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 AC242852.2-201ENST00000615738 1807 ntBASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRBV27A0A0K0K1C4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV27A0A0K0K1C4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV27A0A0K0K1C4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV27A0A0K0K1C4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV27A0A0K0K1C4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV27A0A0K0K1C4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRBV27A0A0K0K1C4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV27A0A0K0K1C4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV27A0A0K0K1C4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV27A0A0K0K1C4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV27A0A0K0K1C4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
TRBV27A0A0K0K1C4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV27A0A0K0K1C4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV27A0A0K0K1C4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV27A0A0K0K1C4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV27A0A0K0K1C4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV27A0A0K0K1C4 AL592295.1-201ENST00000400984 884 ntBASIC16.02■□□□□ 0.16
TRBV27A0A0K0K1C4 RPS2P7-201ENST00000447334 885 ntBASIC16.02■□□□□ 0.16
TRBV27A0A0K0K1C4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV27A0A0K0K1C4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV27A0A0K0K1C4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV27A0A0K0K1C4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV27A0A0K0K1C4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRBV27A0A0K0K1C4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRBV27A0A0K0K1C4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.02■□□□□ 0.15
TRBV27A0A0K0K1C4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
TRBV27A0A0K0K1C4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV27A0A0K0K1C4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV27A0A0K0K1C4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV27A0A0K0K1C4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV27A0A0K0K1C4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV27A0A0K0K1C4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBV27A0A0K0K1C4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRBV27A0A0K0K1C4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV27A0A0K0K1C4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRBV27A0A0K0K1C4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV27A0A0K0K1C4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV27A0A0K0K1C4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV27A0A0K0K1C4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRBV27A0A0K0K1C4 ALDH1A3-203ENST00000557963 1670 ntBASIC15.99■□□□□ 0.15
TRBV27A0A0K0K1C4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.99■□□□□ 0.15
TRBV27A0A0K0K1C4 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.99■□□□□ 0.15
TRBV27A0A0K0K1C4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms