Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AC092666.2-201ENST00000613287 246 ntBASIC20.68■□□□□ 0.9
TRAV17A0A0B4J275 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
TRAV17A0A0B4J275 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV17A0A0B4J275 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAV17A0A0B4J275 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAV17A0A0B4J275 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAV17A0A0B4J275 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.67■□□□□ 0.9
TRAV17A0A0B4J275 AC233992.3-201ENST00000607491 485 ntBASIC20.67■□□□□ 0.9
TRAV17A0A0B4J275 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV17A0A0B4J275 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAV17A0A0B4J275 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV17A0A0B4J275 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV17A0A0B4J275 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV17A0A0B4J275 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAV17A0A0B4J275 IRS3P-201ENST00000223076 1006 ntBASIC20.66■□□□□ 0.9
TRAV17A0A0B4J275 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV17A0A0B4J275 BX842568.3-201ENST00000418104 571 ntBASIC20.66■□□□□ 0.9
TRAV17A0A0B4J275 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAV17A0A0B4J275 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV17A0A0B4J275 MIR6821-201ENST00000617625 74 ntBASIC20.66■□□□□ 0.9
TRAV17A0A0B4J275 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV17A0A0B4J275 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRAV17A0A0B4J275 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV17A0A0B4J275 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAV17A0A0B4J275 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 AC104564.3-201ENST00000582367 638 ntBASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRAV17A0A0B4J275 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV17A0A0B4J275 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV17A0A0B4J275 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAV17A0A0B4J275 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV17A0A0B4J275 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TRAV17A0A0B4J275 AC097381.1-201ENST00000429019 1296 ntBASIC20.64■□□□□ 0.89
TRAV17A0A0B4J275 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV17A0A0B4J275 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV17A0A0B4J275 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV17A0A0B4J275 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV17A0A0B4J275 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAV17A0A0B4J275 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAV17A0A0B4J275 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV17A0A0B4J275 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAV17A0A0B4J275 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAV17A0A0B4J275 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRAV17A0A0B4J275 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV17A0A0B4J275 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAV17A0A0B4J275 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 AP003733.4-201ENST00000623785 1697 ntBASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 pRNA.6-201ENST00000610482 90 ntBASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 pRNA.5-201ENST00000612139 90 ntBASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 pRNA.11-201ENST00000618423 90 ntBASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 pRNA.13-201ENST00000619112 90 ntBASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 AC141586.4-201ENST00000624558 1573 ntBASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV17A0A0B4J275 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV17A0A0B4J275 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV17A0A0B4J275 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV17A0A0B4J275 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAV17A0A0B4J275 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.61■□□□□ 0.89
TRAV17A0A0B4J275 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAV17A0A0B4J275 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV17A0A0B4J275 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV17A0A0B4J275 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV17A0A0B4J275 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TRAV17A0A0B4J275 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms