Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV39A0A0B4J263 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV39A0A0B4J263 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRAV39A0A0B4J263 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV39A0A0B4J263 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV39A0A0B4J263 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV39A0A0B4J263 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV39A0A0B4J263 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 MIR4508-201ENST00000584178 70 ntBASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV39A0A0B4J263 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 ALDH1A3-203ENST00000557963 1670 ntBASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV39A0A0B4J263 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 YBX1P4-201ENST00000392794 808 ntBASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 AC103724.3-201ENST00000564481 992 ntBASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV39A0A0B4J263 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV39A0A0B4J263 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAV39A0A0B4J263 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV39A0A0B4J263 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV39A0A0B4J263 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV39A0A0B4J263 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TRAV39A0A0B4J263 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV39A0A0B4J263 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV39A0A0B4J263 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV39A0A0B4J263 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV39A0A0B4J263 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV39A0A0B4J263 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV39A0A0B4J263 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAV39A0A0B4J263 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV39A0A0B4J263 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV39A0A0B4J263 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV39A0A0B4J263 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV39A0A0B4J263 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
TRAV39A0A0B4J263 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV39A0A0B4J263 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV39A0A0B4J263 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TRAV39A0A0B4J263 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV39A0A0B4J263 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV39A0A0B4J263 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV39A0A0B4J263 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV39A0A0B4J263 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV39A0A0B4J263 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV39A0A0B4J263 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
TRAV39A0A0B4J263 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.89■□□□□ 0.62
TRAV39A0A0B4J263 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV39A0A0B4J263 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV39A0A0B4J263 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV39A0A0B4J263 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV39A0A0B4J263 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV39A0A0B4J263 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV39A0A0B4J263 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms